GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS PVXPOVX 6432 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Potato Virus X complete genomic RNA
ACCESSION X55802
KEYWORDS coat protein.
SOURCE Potato virus X RNA.
ORGANISM Potato virus X
Viridae; ss-RNA nonenveloped viruses; Rod-shaped ss-RNA viruses;
Potexvirus.
REFERENCE 1 (bases 1 to 6432)
AUTHORS Orman,B.E., Celnik,R.M., Mandel,A.M., Torres,H.N. and
Mentaberry,A.N.
TITLE Complete cDNA sequence of a South American isolate of potato virus
X
JOURNAL Virus Res. 16, 293-306 (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 6432)
AUTHORS Mentaberry,A.N.
JOURNAL Unpublished (1991)
STANDARD full automatic
COMMENT *source: strain=CP; library=cDNA in Bluescript; South American
Isolate of Potato Virus X.
From EMBL entry POPOVX; dated 23-JAN-1991.
FEATURES Location/Qualifiers
5'UTR 1..84
CDS 85..4455
/note="ORF1"
/product="166K protein"
/codon_start=85
CDS 4486..5166
/note="ORF2"
/product="24K protein"
/codon_start=4486
CDS 5147..5494
/note="ORF3"
/product="12K protein"
/codon_start=5147
CDS 5427..5639
/note="ORF4"
/product="8K protein"
/codon_start=5427
CDS 5650..6360
/note="ORF5"
/product="viral coat protein"
/codon_start=5650
3'UTR 6362..6432
BASE COUNT 1923 a 1647 c 1513 g 1349 t
ORIGIN
1 gaaaactaaa ccaaacacca ccaacacagc caaacccacc acgcccaatt aacacacacc
61 cgcttgaaaa agaaagtctg ttaaatggcc aaggtgcgcg aggtttacca atcattcacc
121 gattccacta caaaaacact tattcaggat gaggcgtacc gtaacatacg tcccatcatg
181 gaaaaacaca agttatccaa cccatacgct caaactatcg aagcagccaa cgatcttgaa
241 ggatttggca tagccacaaa cccttacagc atcgagttac atacacatgc ggccgctaag
301 acaattgaga ataaactttt ggaggtgcta ggctccctct tgccacaaga gcctgtcaca
361 ttcatgtttc tcaaacctag aaagctaaat ttcatgagga gaaacccccg gatcaaggac
421 attttccata atgtcgccat tgaaccgaga gatgttgcta gatacccaaa ggaaaccatc
481 atacacaaac tagcagagat agagacggac acggcataca tcagcgacac tctacacttc
541 ctcgacccga gctatattgt agagacgttc cagaactgtc cgaaactaca aacactctac
601 gccacactcg tcctccccag tgaagctgct ttcaaaatgg aaagcaccca cccaaacata
661 tacagcctga agtactttgg tgacggcttc cagtacatac caggcaacca tggtggtgga
721 gcttatcacc atgaattcac cgacctgcag tggctaaaag ttggtaagat caagtggcgc
781 gacccaaagg acggtctact cggacatctt aactacacac atgagcaggt cgacacacac
841 acagtgaccg tacagctcca agagtccttc gctgcaaacc acttgtattg catcagaaga
901 ggaaatatga tgacaccaga ggtacgcacg tttgggcaac cagacaggta tgtgctgcca
961 ccacaaatct tcctcccaaa ggtacacaac tgcaagaagc ccatcctgaa gaaaaccatg
1021 atgcagctct ttctatacgt caggacagtc aaagtggcaa agaactgtga tatatttgcc
1081 aaggtaagac aactaattaa gtcctccgac cgggacaaat tctcggcggt tgagctagtc
1141 tacctagtca gttacatgga gtttctagcc gccctacagg ctaccacctg cttctcagac
1201 actttatcgg gcggcttact aacaaagact ctagcccctg taagggcttg gattcaagaa
1261 aagaagatgc aactttgtgg cttggaagac tacgtaaaac tggtcaaagc ggtggactgg
1321 cgcccagtgg acttctcttt taaagttgaa acctgggact tcagattcac tcaactaggc
1381 atgtggaagg ctttccagcc cagtgagctg tcagacgtgg aagagatgaa caacttcttt
1441 gacgatggcg acttgctgga ctgttttaca aggatgccag cttatgcagt caacgctgaa
1501 gaagacctgg ccgggatgag gggaaacaat caggaagaga catcaacagc ccctagagaa
1561 cccgagggag agaaaaagga atacatcaac ccggcagaaa ccttcctaga caaactgact
1621 aggaaacaca atcgggaaac caggagtcgc gctgcaaaga aagccaaacg cctggccgaa
1681 atccaagact ccatgaacag ggacaggact gaggaaggaa gtcataagac acccaacatg
1741 ggcgaagcgc caagcaatgc tgatcttccc ggcgtcaatg aagtggaggc tggcaccaca
1801 ttcccgacct tgaaagccct accacaaaaa tgggaagatg catcatccac tgactcctca
1861 acaattgacc cgacggaaat catcccagga gaagaggacg acaaggccgc aacgcaaaaa
1921 gtggtggtag gactcccttg gaaacactgg ctcccccagc tgaatgcagt cggcttcaag
1981 gccctagaaa tccaaagaga cagaaatggg accatgatca tgcccatcac cgaaatggtt
2041 tttggacttg acaaagaaga gttccctgaa ggaacccctg aagcactagc tcgtgagctc
2101 aaagccatga atcgaagccc aaccacaatt cccttggact tactcagggc cagggactat
2161 gggagcgatg ttaaaaataa gaggattggg gcaatcacta agactcaggc tgccagctgg
2221 ggtgagtacc taactggaaa aattgagagc ttaccagaga ggaaagtggc tgcttgtgtc
2281 atccatgggg ctgggggatc tggcaagagc cacgcgatcc aaaaagcgct gagagagatt
2341 ggcaaggggt cagacattac tgtagtgctc ccaacaaatg agctgcggct ggactggagc
2401 aagaaggtcc caaacacaga gccctacatg ttcaagactt atgagaaagc cctaattggt
2461 ggaacaggaa gcatagtgat cttcgatgat tactctaagc taccaccagg ttatattgag
2521 gcactcgtca gcttctccac aaaaataaaa ttgatcattc ttactggaga tagcagacaa
2581 agtgtctacc atgagacgtc agatgacgct tctatcaggc acttaggccc ggctactgaa
2641 gtgtttgcta agtactgcag gtactacttg aacgccacac accgcaacaa gaaagacttg
2701 gcaaacatgc taggtgtgta cagcgagaga accggcacca ctgaaataag tatgagctct
2761 gaatttctgg aaggtgttcc gaccctagtg ccctcagacg aaaagaggag gttgtacatg
2821 ggcacaggca ggaatgacac attcacatac gcaggatgcc aaggtctcac gaagccaaaa
2881 gtccagatcg tgctagacca caacactcaa gtgtgtagcg ccaatgttat gtactcagca
2941 ctatccaggg ccactgatag gattcacttc atcaacacta gtgccaactc atccgctttc
3001 tgggaaaagc ttgacagcac cccttacctg aagacctttc tatctgtcgt aagggagcat
3061 gcacttaagg agtatgagcc tgccgaagct gagccgatta aggagcccga accccagact
3121 cacatgtgcg tggagaatga ggagtctgta ctagaggagt acaaggaaga gttgctggaa
3181 aaatttgaca gggagatcca ctcagatgca cacggacact ccaactgcgt gcagactgaa
3241 gacaccacaa tacagctatt ctcccatcaa gaggccaaag atgagactct tctatgggca
3301 accattgatg ctcgcctgaa gaccagcaac caagaaagca acttccgtga gttcctgagt
3361 aagagagaca ttggagatgt cctcttctta aattaccaga aggcaatggg gctgccaaag
3421 gaaccaatcc ctttctcaca ggaggtgtgg gaggcgtgcg cgcatgaggt gcagagtaag
3481 tacttgagca agtctaagtg caacctcatc aatggcacag ttaggcagag tcctgacttt
3541 gatgaaaaca aaatcatggt attccttaag tcccaatggg taactaaagt cgaaaagctg
3601 ggattgccaa aaatcaaacc gggtcagact attgccgcct tttaccaaca gacagttatg
3661 ctctttggca caatggctcg atacatgcgt tggtttaggc aggcgtttca acccaaggaa
3721 gtcttcatca attgtgagac gacacctgag gacatgtcgg catgggcttt gagcaactgg
3781 aacttcacga ggcccagtct tgcaaatgac tacacggcct ttgatcagtc acaggacgga
3841 gccatgttgc agtttgaggt acttaaagcc aagcatcact gcatcccaga agagatcatc
3901 caggcataca ttgacatcaa gacaaacgca caaattttct taggcactct gtcaatcatg
3961 cgactcactg gagaaggccc aacatttgat gccaatactg agtgcaacat cgcctttaca
4021 cacaccaagt ttgacatacc cgcaggtaca gctcaagtgt acgctggcga tgactcggcg
4081 ctagactgtg ttccagaagt taagcaaagc ttccacaggc tggaagataa gttgttactc
4141 aagtccaagc cggtcatcac ccagcaaaag aaaggaagtt ggcccgaatt ctgtggatgg
4201 ttaatcacac cgaaaggagt catgaaagac cccatcaaat tgcacgtgag cttgaagctc
4261 gctgaagcta aaggggagct gaggaagtgt caggactcgt atgagataga cctgagttac
4321 gcctacgacc acaaggactc actgcatgat ttgtttgatg agaagcagtg ccaagcacat
4381 acactgacat gcaggacctt aataaagtcc ggacggggca ctgttagcct tccccgcctc
4441 aagaatttcc tataaccgtt aagttaccat ttagacttga ataagatgga tattctcatc
4501 attagtttga aaagtttagg ttactctaga actgctaggc ctttagattc cagtccctta
4561 gtagtgcacg ctgttgccgg tgccggaaag tccactgcac tacggaagct gcttgcacga
4621 cactcgacct tcacagtaca cactcttgga gtcccagata agatcagtat aaggaccagg
4681 ggcatacaga agccaggacc aatccccgaa ggcaattttg ccatcctgga cgagtacacg
4741 ctggacgcaa ccacaaggga ggcttaccaa gctctctttg cagatccgta tcaggcacca
4801 gaactcagtc tcgagcccca cttctacttg gaaacctcct tcaggacccc aaccaaagca
4861 gctgccttga tagctagctg cggctttgac tttgagacca attcgcaaga agagggacac
4921 ctcgagatca cagggatatt caagggaccc ttgctaggaa aggtgattgc catagactca
4981 gaggctgaaa cgactttgtc taggcacgga gttgaatttg ttaagccgtg ccaagtcacg
5041 ggtctggaat tcccggtagt caccatcgtg tccgcagccc cgatcgaaga aattggccag
5101 tccactctgt tctacaacgc aatcacaagg tcgaagggac tgacttatgt ccgcgcaggg
5161 gcatagactg accgcaccgg tcaactctga aaaagtgtac atagtattag gtttatcatt
5221 tgctttgatt tcaattactt tcctgctttc tagaagtaac ttgcctcacg tcggggacaa
5281 tatccacagc ctaccacacg ggggagccta cagggacggc acaaaggcgg tactatacaa
5341 ttcacccaac ttcggctcta gaactagcct gagcaacggc aagaacgcag ccttcgctgt
5401 tgtgcttttg ctgtcgctac taatatatgg aagcaggtgc ttatctcaac gcaatcatct
5461 ttgtgcttgt ggcaacaatc atagcagtca ttagccgtgg gttgactcgg acagagccat
5521 gcaccatcag aattactggt gagtcgatca cggtacacgc ttgccacata gacagcgaga
5581 cgatcaaggc tctggctaat ctcaaaccac tctcacttga gcggttaagt ttccagtgat
5641 aattgaaaga tgactacacc agccaacacc actcaagctg taggatccac caaatcaact
5701 accaccacca ctgcaggcgc aactcctgcc aattcagggc tattcaccat accagatggg
5761 gacttcttca gcaccgcaaa ggctgtggtc gctagcaatg ccgtggccac caacgaggat
5821 ctcgccaaaa tacaggaaat ctggaaggac aagaaaattc cttcagacac tatggctcag
5881 gcagcttggg acttagtgag acactgtgcc gacgtcgggt cctctgccca aactgaaatg
5941 ataggcaccg gtccatactc caatggggtc agccgggcta gactggcagc tgcaattaaa
6001 gaggtgtgca cactgaggca gttctgcaaa aagtatgccc ccgtggtctg gaactggatg
6061 ctcacaaaca acagcccacc ggccaactgg caggcacaag gcttcaagcc ggagcacaaa
6121 ttcgcagcct ttgacttctt tgatggagtc actaatcccg cagctatcac tcccaaagag
6181 gggctcatga gacctccgtc tgaagcagaa atgaatgccg cccaaactgc tgcctttgtg
6241 aagatcacca aggcgagggc gcaatccaac gactttgcca gtctggatgc cgcggtcact
6301 aggggccgca tcacaggaac gactgttgca gaagcagttg tttcactacc cccaccataa
6361 ctacgtccac ataaccgacg cgtatcccag tttcatagta ttttctggtt tgattgtatg
6421 aataatataa at
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