GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS VACHINLJ 7586 bp ds-DNA VRL 28-MAY-1991
DEFINITION Vaccinia virus gene cluster with thymidine kinase gene
ACCESSION X01978 J02424 K02376 V01537
KEYWORDS thymidine kinase; unidentified reading frame.
SOURCE Vaccinia virus DNA.
ORGANISM Vaccinia virus
Viridae; ds-DNA enveloped viruses; Poxviridae; Orthopoxvirus.
REFERENCE 1 (bases 4117 to 5426)
AUTHORS Weir,J.P. and Moss,B.
TITLE Nucleotide sequence of the vaccinia virus thymidine kinase gene and
the nature of spontaneous frameshift mutations
JOURNAL J. Virol. 46, 530-537 (1983)
STANDARD full automatic
REFERENCE 2 (bases 4389 to 5179)
AUTHORS Hruby,D.E., Maki,R.A., Miller,D.B. and Ball,L.A.
TITLE Fine structure analysis and nucleotide sequence of the vaccinia
virus thymidine kinase gene
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 80, 3411-3415 (1983)
STANDARD full automatic
REFERENCE 3 (bases 2258 to 4122)
AUTHORS Weir,J.P. and Moss,B.
TITLE Regulation of expression and nucleotide sequence of a late vaccinia
virus gene
JOURNAL J. Virol. 51, 662-669 (1984)
STANDARD full automatic
REFERENCE 4 (bases 1 to 7586)
AUTHORS Plucienniczak,A., Schroeder,E., Zettlmeissl,G. and Streeck,R.E.
TITLE Nucleotide sequence of a cluster of early and late genes in a
conserved segment of the vaccinia virus genome
JOURNAL Nucleic Acids Res. 13, 985-998 (1985)
STANDARD full automatic
COMMENT SWISS-PROT; P03295; V28K$VACCV. SWISS-PROT; P03297; KITH$VACCV.
SWISS-PROT; P07391; RPO6$VACCV. SWISS-PROT; P07392; RPO1$VACCV.
SWISS-PROT; P07611; VFP1$VACCV. SWISS-PROT; P07612; VFP2$VACCV.
SWISS-PROT; P07613; VFP3$VACCV. SWISS-PROT; P07614; VFP4$VACCV.
SWISS-PROT; P07615; VFP6$VACCV. SWISS-PROT; P07616; VFP7$VACCV.
SWISS-PROT; P07617; VFP9$VACCV. SWISS-PROT; P07618; YF11$VACCV.
Data kindly reviewed (13-FEB-1986) by R. Streeck
From EMBL entry PVHINLJ; dated 06-JUL-1989.
FEATURES Location/Qualifiers
CDS <1..909
/note="F1 polypeptide"
/codon_start=1
CDS 913..1662
/note="F2 polypeptide"
/codon_start=913
CDS 1697..1972
/note="F3 polypeptide"
/codon_start=1697
CDS complement(1954..3003)
/note="F4 polypeptide"
/codon_start=3003
CDS 3028..3780
/note="F5 polypeptide 28K late protein [3]"
/codon_start=3028
CDS 3793..4176
/note="F6 polypeptide"
/codon_start=3793
CDS 4136..4594
/note="F7 pot.polypeptide"
/codon_start=4136
CDS 4613..5143
/note="F8 polypeptide thymidine kinase [2]"
/codon_start=4613
CDS 5212..6210
/note="F9 polypeptide"
/codon_start=5212
CDS 6128..6682
/note="F10 polypeptide"
/codon_start=6128
CDS complement(6775..7146)
/note="F11 polypeptide"
/codon_start=7146
CDS 7253..>7586
/note="F12 polypeptide"
/codon_start=7253
BASE COUNT 2583 a 1221 c 1349 g 2433 t
ORIGIN
1 aagcttttag aatatgtgca tataggacca ctagcaaaag ataaagagga taaagtaaag
61 aaaagatatc cagagtttag attagtcaac acaggacccg gtggtctttc ggcattgtta
121 agacaatcgt ataatggaac cgcacccaat tgctgtcgca cttttaatcg tactcattat
181 tggaagaagg atggaaagat atcagataag tatgaagagg gtgcagtatt agaatcgtgt
241 tggccagacg ttcacgacac cggaaaatgc gatgttgatt tattcgactg gtgtcagggg
301 gatacgtccg atagaaacat atgccatcag tggatcggtt cagcctttaa taggagtaat
361 agaactgtag agggtcaaca atcgttaata aatctgtata ataagatgca aacattatgt
421 agtaaagatg ctagtgtacc aatatgtgaa tcatttttgc atcatttacg cgcacacaat
481 acagaagata gcaaagagat gatcgattat attctaagac aacagtctgc ggactttaaa
541 cagaaatata tgagatgtag ttatcccact agagataagt tagaagagtc attaaaatat
601 gcggaacctc gagaatgttg ggatccagag tgttcgaatg ccaatgttaa tttcttgcta
661 acacgtaatt ataataattt aggactttgc aatattgtac gatgtaatac tagcgtgaac
721 aacttacaga tggataaaac ttcctcatta agattgtcat gtggattaag caatagtgat
781 agattttcta ctgttcccgt caatagagca aaagtagttc aacataatat taaacactcg
841 ttcgactcaa aattgcattt gatcagttta ttatctctct tggtaatatg gatactaatt
901 gtagctattt aaatgggtgc cgcggcaagc atacagacga cggtgaatac actcagcgaa
961 cgtatctcgt ctaaattaga acaagaagcg aatgctagtg ctcaaacaaa atgtgatata
1021 gaaatcggaa atttttatat ccgacaaaac catggatgta acctcactgt taaaaatatg
1081 tgctctgcgg acgcggatgc tcagttggat gctgtgttgt cagccgctac agaaacatat
1141 agtggattaa caccggaaca aaaagcatac gtgccagcta tgtttactgc tgcgttaaac
1201 attcagacga gtgtaaacac tgttgttaga gattttgaaa attatgtgaa acagacttgt
1261 aattctagcg cggtcgtcga taacaaatta aagatacaaa acgtaatcat agatgaatgt
1321 tacggagccc caggatctcc aacaaatttg gaatttatta atacaggatc tagcaaagga
1381 aattgtgcca ttaaggcgtt gatgcaattg acgactaagg ccactactca aatagcacct
1441 aaacaagttg ctggtacagg agttcagttt tatatgattg ttatcggtgt tataatattg
1501 gcagcgttgt ttatgtacta tgccaagcgt atgttgttca catccaccaa tgataaaatc
1561 aaacttattt tagccaataa ggaaaacgtc cattggacta cttacatgga cacattcttt
1621 agaacttctc cgatggttat tgctaccacg gatatgcaaa actgaaaata tattgataat
1681 attttaatag attaacatgg aagttatcac tgatcgtcta gacgatatag tgaaacaaaa
1741 tatagcggat gaaaaatttg tagattttgt tatacacggt ctagagcatc aatgtcctgc
1801 tatacttcga ccattaatta ggttgtttat tgatatacta ttatttgtta tagtaattta
1861 tatttttacg gtacgtctag taagtagaaa ttatcaaatg ttgttggcgt tggtggcgct
1921 agtcatcaca attaactatt ttttattact ttatactata atagtactag actgacttct
1981 aacaaacatc tcacctgcca taaataaatg cttgatatta aagtcttcta tttctaacac
2041 tattccatct gtggaaaata atactctgac attatcgcta attgacacat cggtgagtga
2101 tatgcctata aagtaataat cttctttggg cacatatacc agtgtaccag gttctaacaa
2161 cctatttact ggtgctccta tagcatactt tttctttacc ttgagaatat ccatcgtttg
2221 cttggtcaat agcgatatgt gattttttat caaccactcg aaaaagtaat tggagtgttc
2281 atatcctcta cgggctattg tctcatggcc gtgtatgaaa tttaagtaac acgactgtgg
2341 tagatttgtt ctatagagcc ggttgccgca aatagataga actaccaata tgtctgtaca
2401 aatgttaaac attaattgat taacagaaaa aacaatgttc gttctgggaa tagaaaccag
2461 atcaaaacaa aattcgttag aatatatgcc acgtttatac attgaatata aaataactac
2521 agtttgaaaa ataacagtat catttaaaca tttaacttgc ggggttaatc tcacaacttt
2581 actgtttttg aactgttcaa aatatagcat agatccgtga gaaatacgtt tagccgcctt
2641 taatagagga aatcccaccg cctttctgga tctcaccaac gacgatagtt ctgaccagca
2701 actcatttct tcatcatcca cctgttttaa catataatag gcaggagata gatatccgtc
2761 attgcaatat tccttctcgt aggcacacaa tctaatattg ataaaatctc cattctcttc
2821 tctgcattta ttatcttgtt tcggtggctg attaggctgt agtcttggtt taggctttgg
2881 tatatcgttg ttgaatctat tttggtcatt aaatctttca tttcttcctg gtatattttt
2941 atcacctcgt ttggttggat ttttgtctat attatcgttt gtaacatcgg tacgggtatt
3001 catttatcac aaaaaaaact tctctaaatg agtctactgc tagaaaacct catcgaagaa
3061 gataccatat tttttgcagg aagtatatct gagtatgatg atttacaaat ggttattgcc
3121 ggcgcaaaat ccaaatttcc aagatctatg ctttctattt ttaatatagt acctagaacg
3181 atgtcaaaat atgagttgga gttgattcat aacgaaaata tcacaggagc aatgtttacc
3241 acaatgtata atataagaaa caatttgggt ctaggagatg ataaactaac tattgaagcc
3301 attgaaaact atttcttgga tcctaacaat gaagttatgc ctcttattat taataatacg
3361 gatatgactg ccgtcattcc taaaaaaagt ggtaggagaa agaataagaa catggttatc
3421 ttccgtcaag gatcatcacc tatcttgtgt attttcgaaa ctcgtaaaaa gattaatatt
3481 tataaagaaa atatggaatc cgcgtcgact gagtatacac ctatcggaga caacaaggct
3541 ttgatatcta aatatgcggg aattaatatc ctaaatgtgt attctccttc cacatccata
3601 agattgaatg ccatttacgg attcaccaat aaaaataaac tagagaaact tagtactaat
3661 aaggaactag aatcgtatag ttctagccct cttcaagaac ccattaggtt aaatgatttt
3721 ctgggactat tggaatgtgt taaaaagaat attcctctaa cagatattcc gacaaaggat
3781 tgattactat aaatggagaa tgttcctaat gtatacttta atcctgtgtt tatagagccc
3841 acgtttaaac attctttatt aagtgtttat aaacacagat taatagtttt atttgaagta
3901 ttcgttgtat tcattctaat atatgtattt tttagatctg aattaaatat gttcttcatg
3961 cctaaacgaa aaatacccga tcctattgat agattacgac gtgctaatct agcgtgtgaa
4021 gacgataaat taatgatcta tggattacca tggatgacaa ctcaaacatc tgcgttatca
4081 ataaatagta aaccgatagt gtataaagat tgtgcaaagc ttttgcgatc aataaatgga
4141 tcacaaccag tatctcttaa cgatgttctt cgcagatgat gattcatttt ttaagtattt
4201 ggctagtcaa gatgatgaat cttcattatc tgatatattg caaatcactc aatatctaga
4261 ctttctgtta ttattattga tccaatcaaa aaataaatta gaagccgtgg gtcattgtta
4321 tgaatctctt tcagaggaat acagacaatt gacaaaattc acagactttc aagattttaa
4381 aaaactgttt aacaaggtcc ctattgttac agatggaagg gtcaaactta ataaaggata
4441 tttgttcgac tttgtgatta gtttgatgcg attcaaaaaa gaatcctctc tagctaccac
4501 cgcaatagat cctgttagat acatagatcc tcgtcgcaat atcgcatttt ctaacgtgat
4561 ggatatatta aagtcgaata aagtgaacaa taattaattc tttattgtca tcatgaacgg
4621 cggacatatt cagttgataa tcggccccat gttttcaggt aaaagtacag aattaattag
4681 acgagttaga cgttatcaaa tagctcaata taaatgcgtg actataaaat attctaacga
4741 taatagatac ggaacgggac tatggacgca tgataagaat aattttgaag cattggaagc
4801 aactaaacta tgtgatgtct tggaatcaat tacagatttc tccgtgatag gtatcgatga
4861 aggacagttc tttccagaca ttgttgaatt ctgtgagcgt atggcaaacg aaggaaaaat
4921 agttatagta gccgcactcg atgggacatt tcaacgtaaa ccgtttaata atattttgaa
4981 tcttattcca ttatctgaaa tggtggtaaa actaactgct gtgtgtatga aatgctttaa
5041 ggaggcttcc ttttctaaac gattgggtga ggaaaccgag atagaaataa taggaggtaa
5101 tgatatgtat caatcggtgt gtagaaagtg ttacatcgac tcataatatt atatttttta
5161 tctaaaaaac taaaaataaa cattgattaa attttaatat aatacttaaa aatggatgtt
5221 gtgtcgttag ataaaccgtt tatgtatttt gaggaaattg ataatgagtt agattacgaa
5281 ccagaaagtg caaatgaggt cgcaaaaaaa ctgccgtatc aaggacagtt aaaactatta
5341 ctaggagaat tattttttct tagtaagtta cagcgacacg gtatattaga tggtgccacc
5401 gtagtgtata taggatctgc tcccggtaca catatacgtt atttgagaga tcatttctat
5461 aatttaggag tgatcatcaa atggatgcta attgacggcc gccatcatga tcctatttta
5521 aatggattgc gtgatgtgac tctagtgact cggttcgttg atgaggaata tctacgatcc
5581 atcaaaaaac aactgcatcc ttctaagatt attttaattt ctgatgtgag atccaaacga
5641 ggaggaaatg aacctagtac ggcggattta ctaagtaatt acgctctaca aaatgtcatg
5701 attagtattt taaaccccgt ggcgtctagt cttaaatgga gatgcccgtt tccagatcaa
5761 tggatcaagg acttttatat cccacacggt aataaaatgt tacaaccttt tgctccttca
5821 tattcagctg aaatgagatt attaagtatt tataccggtg agaacatgag actgactcga
5881 gttaccaaat cagacgctgt aaattatgaa aaaaagatgt actaccttaa taagatcgtc
5941 cgtaacaaag tagttgttaa ctttgattat cctaatcagg aatatgacta ttttcacatg
6001 tactttatgc tgaggaccgt gtactgcaat aaaacatttc ctactactaa agcaaaggta
6061 ctatttctac aacaatctat atttcgtttc ttaaatattc caacaacatc aactgaaaaa
6121 gttagtcatg aaccaataca acgtaaaata tctagcaaaa attctatgtc taaaaacaga
6181 aatagcaaga gatccgtacg cagtaataaa tagaaacgta ctactgagat atactaccga
6241 tatagagtat aatgatttag ttactttaat aaccgttaga cataaaattg attctatgaa
6301 aactgtgttt caggtattta acgaatcatc cataaattat actccggttg atgatgatta
6361 tggagaacca atcattataa catcgtatct tcaaaaaggt cataacaagt ttcctgtaaa
6421 ttttctatac atagatgtgg taatatctga cttatttcct agctttgtta gactagatac
6481 tacagaaact aatatagtta atagtgtact acaaacaggc gatggtaaaa agactcttcg
6541 tcttcccaaa atgttagaga cggaaatagt tgtcaagatt ctctatcgcc ctaatatacc
6601 attaaaaatt gttagatttt tccgcaataa catggtaact ggagtagaga tagccgatag
6661 atctgttatt tcagtcgctg attaatcaat tagtagagat gagataagaa cattataata
6721 atcaataata tatcttatat ctcgtttaga aaaatgctaa tattaaaata gctaacgcag
6781 taatccaatc ggaagccatt tgatatctat aatagggtat ctaatttcct gattcagata
6841 gcggacagct atattctcgg tagctactcg tttggaatca caaacattat ttacatctaa
6901 tttactatct gtaatggaaa cgtttcccaa tgaaatggta caatccgata cattgcattt
6961 tgttatattt ttttttaaag aggctggtaa caacgcatcg cttcgtttac atggctcgta
7021 ccaacaataa tagggtaatc ttgtatctat tcctatccgt actatgcttt tatcaggata
7081 aatacattta catcgtatat cgtctttgtt agcatcacag aatgcataaa tttgttcgtc
7141 cgtcatgata aaaatttaaa gtgtaaatat aactattatt tttatagttg taataaaaag
7201 ggaaatttga ttgtatacct tcggttcttt aaaagaaact gacttgataa aaatggctgt
7261 aatctctaag gttacgtata gtctatatga tcaaaaagag attaatgcta cagatattat
7321 cattagtcat gttaaaaatg acgacgatat cggtaccgtt aaagatggta gactaggtgc
7381 tatggatggg gcattatgta agacttgtgg gaaaacggaa ttggaatgtt tcggtcagtg
7441 gggtaaagta agtatttata aaactcatat agttaagcct gaatttattt cagaaatcac
7501 tcgtttactg aatcatatat gtattcactg cggattattg cgttcacgag aaccgtattc
7561 cgacgatatt aacctaaaag agttat
//