GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS PCBBAEV 132 bp ds-DNA VRL 28-MAY-1991
DEFINITION Baboon endogenous virus (BaEV M7) RNA 5' end
ACCESSION V01171
KEYWORDS complementary DNA.
SOURCE Baboon endogenous virus DNA.
ORGANISM Baboon endogenous virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Retroviridae; Oncovirinae; Type C oncovirus group;
Mammalian type C oncoviruses.
REFERENCE 1 (bases 1 to 132)
AUTHORS Lovinger,G.G. and Schochetman,G.
TITLE 5' terminal nucleotide sequences of type C retroviruses: Features
common to noncoding sequences of eucaryotic messenger RNAs
JOURNAL Cell 20, 441-449 (1980)
STANDARD full automatic
COMMENT cDNA is shown here as DNA. SEE ALSO <REMMC1> AND <RERD11>.
From EMBL entry REBAEV; dated 06-JUL-1989.
BASE COUNT 32 a 35 c 38 g 27 t
ORIGIN
1 atgttagaat cacgttcctt agggtttgag agtcggcgcg aggaaccacc caacacacaa
61 atttcggcag aaagtcgttt actggtgcac cagggccctc cctctaagga atgtggtaga
121 gcgcgcgcgc gc
//GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS PCBBAEVM7 8507 bp ds-DNA VRL 28-MAY-1991
DEFINITION Baboon endogenous virus (BaEV), complete genome.
ACCESSION D00088
KEYWORDS complete genome; endogenous retrovirus; provirus.
SOURCE Baboon endogenous virus DNA.
ORGANISM Baboon endogenous virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Retroviridae; Oncovirinae; Type C oncovirus group;
Mammalian type C oncoviruses.
REFERENCE 1 (bases 1 to 8507)
AUTHORS Kato,S., Matsuo,K., Nishimura,N., Takahashi,N. and Takano,T.
TITLE The entire nucleotide sequence of baboon endogenous virus DNA: A
chimeric genome structure of murine type C and simian type D
retroviruses
JOURNAL Jpn. J. Genet. 62, 127-137 (1987)
STANDARD full automatic
COMMENT SWISS-PROT; P10268; GAG$BAEVM. SWISS-PROT; P10269; ENV$BAEVM.
SWISS-PROT; P10272; POL$BAEVM.
The M7 strain of baboon endogenous virus (BaEV) is a type C
retrovirus originally isolated from a baboon placenta by
cocultivation with a human rhabdomyosarcoma cell line, A204. BaEV
is able to replicate in cultured cells of several diverse mammalian
species. The nucleotide sequence analysis showed that the structure
of the BaEV genome is chimeric; the gag-pol region is closely
related to that of murine type C retroviruses and the env is
related to that of simian type D retroviruses.
From EMBL entry REBAEVM7; dated 02-APR-1988.
FEATURES Location/Qualifiers
CDS 985..2598
/note="gag gene protein"
/codon_start=985
CDS 2575..6168
/note="pol gene protein"
/codon_start=2575
CDS 6235..7926
/note="env gene protein"
/codon_start=6235
BASE COUNT 2288 a 2419 c 1925 g 1875 t
ORIGIN
1 aaatgaaaag taaaactttt aggccctccc cgtaaatggt tctgtttgtt cgtggcgcag
61 gcagagtttg ttgcaaggct tgatgtaaga ctcgttacta aatgattaac tgcctttgtt
121 ctgcttctgt aaaactgctt tcccgccctc cgaattgtaa aacaagccct gcctcagccg
181 gaaattccaa accagtatgc taaaggtggc ggggcccgac cgctgcaacc cagacccaag
241 gttgcatcag cgaaggaaaa ctgcattccc cagacctccc cggggctagc acctatccca
301 cccctttgcg tcgccaaata gaaaaagaca cctggcctcg aggttacgaa agaggccaat
361 caatagcctg tatgcaaata aagcctaaac gctataaaag agatgtatcg ccacaaatcg
421 gggctctctc tctctctacc acattcctta gagggagggc cctggtgcac cagtaaacga
481 ctttctgccg aaatttgtgt gttgggtggt tcctcgcgcc gactctcaaa ccctaaggaa
541 cgtgattcta acatctgggg gctcgtccgg gatttgagag gcggccagag gacaccggcc
601 ccttttcctt ttcggcagaa accgcgcggc cccggccacc ggtggcggac ggacgacggg
661 acgactcttg tgtgtagtca ggtactttat ttttgttctg tctttaatct ctgaggtcgg
721 ccaaccttcg taggagtgta gagggaggac agacgtgtcc tggaccctca cactccgacc
781 ccgggggacg ccccggcggt cgtctggagg aaggctgatg acaccgtcag cctcctcaaa
841 tctgaaggca ggttccccct gccatctgaa tcacttgtag tactttggcg ccattctctg
901 gccgcgcggc tcatctgttt ttgtctggtt tgtgttgtta ctgttgtctt atttatatgt
961 gtgtatgagc ctaaggacgg gacaatggga cagacgctaa caactcctct atctttgact
1021 ttgacgcact tttcagacgt ccgggccaga gcccacaatc tttccgtagg agtccgaaaa
1081 ggacgatggc aaactttctg ctcgtccgag tggcccaccc ttcatgtcgg gtggccccgg
1141 gacggaactt ttgacctctc cgttattttg caggttaaga caaaggtaat ggatcctggg
1201 ccgcatggtc acccggacca agtggcctac atcatcacct gggaggatct cgtccgaaat
1261 cctccgcctt gggtgaaacc ctttctccat accccttcta catccaagtc caccctcctt
1321 gccctagaag tcccaaagaa ccggaccctg gatccgccta aacccgtact cccggatgag
1381 tcgcagcaag acctcctctt ccaagaccct ctacctcatc caccacataa tcccctcctg
1441 gaacccccac cctacaactc accctcgccc cctgtcttgt cccccgtttc tcctaccacc
1501 ccttctgccc ccactccttc ctctcttgtc tcctcgtcga ccccgccttc ctctccagcc
1561 ccacctgaac tcacccccag gaccccgcca caaacccccc gtctccgcct ccggcgggcc
1621 gaaggtcagg atggcccttc cacctggcaa tcttcccttt ttccccttcg cacggtcaac
1681 cgcacgatcc agtactggcc cttttctgcc tcggacctct ataattggaa aacccataac
1741 ccctcctttt cccaagaccc ccaggccttg acctcgttga tagaatcaat tctcctcacc
1801 caccagccta cctgggatga ttgtcaacag cttttgcagg tccttctaac caccgaagaa
1861 aggcagcgag tcctcctgga agcccggaaa aatgtgccgg ggcctggagg ccttccaacc
1921 cagctcccca atgaaataga cgagggattt cccctcaccc gcccggactg ggattatgag
1981 acagcaccgg gtagggagag tctccgaatc tatcgccagg ctctgttggc gggtctcaag
2041 ggggcaggaa aacgccccac caatttggcc aaggtaagga ctataactca gggaaaagat
2101 gaaagcccgg cagcctttat ggaaagactt ctggaagggt ttcgaatgta tactccattt
2161 gatccagaag caccagaaca caaggctacc gtggccatgt cgttcataga tcaggcagca
2221 ctagacataa aaggaaaact ccaaaggcta gacgggatcc aaactcatgg gctgcaggaa
2281 ttagtaaggg aggcagaaaa ggtatacaat aaaagggaaa ccccagaaga aagagaagct
2341 aggcttataa aagaacagga agaacgggaa gatcggagag acagaaaaag agataagcat
2401 ttaaccaaaa tcctggcagc cgtagtgact gaaaaaaggg caggaaagtc aggggaaaca
2461 agaaggcggc ctaaagtaga taaggaccag tgcgcctact gcaaagagcg agggcattgg
2521 atcaaggact gccccaagcg tcctagagac cagaagaaac ccgcccctgt cctcacctta
2581 ggtgaggaca gcgaataggg gtgtcagggc tctggagccc cccccgagcc ccggctaact
2641 ctatctgtag gggggcatcc caccaccttc ttggtggaca caggcgccca acactcggtt
2701 ttgaccaagg caaacggacc cctgtcctct cgtacatctt gggtccaggg ggcaacagga
2761 agaaagatgc acaaatggac taaccgccgg acagttaacc tagggcaagg aatggtgaca
2821 cactccttct tggtggtacc tgaatgtccg tacccccttc tggggcgaga tctcctaacc
2881 aaactcggag ctcagatcca cttctccgag gcaggggccc aggtgttaga ccgagatggc
2941 caacccatcc aaattttgac tgtgtctctg caagatgaac accggctttt tgacatcccg
3001 gtcaccacca gcctccctga tgtctggtta caagattttc cccaagcttg ggcggaaacg
3061 ggaggacttg ggcgggccaa gtgtcaagcc ccaatcataa ttgatctaaa gcccacagcg
3121 gtgcctgtat ctatcaaaca ataccccatg agcctagaag ctcatatggg cattcggcaa
3181 cacattatca aatttctaga acttggagtt ttgcgacctt gtcgctcacc ctggaatact
3241 cctcttctgc cagtaaaaaa gcctggtacc caggattaca ggcccgtcca agatttgaga
3301 gaaattaata aaagaactgt ggatatccac cctacggtcc ccaatcctta caacttgctc
3361 agtaccttaa aaccagacta cagctggtat accgtactgg acttaaaaga tgccttcttt
3421 tgtttacccc tggcccccca aagccaggaa ctatttgcct ttgagtggaa ggaccctgag
3481 agaggaatct caggccaatt gacctggact cgacttcccc aggggttcaa aaactctccc
3541 actctcttcg atgaggctct ccacagggac ctcaccgact tccggaccca gcatccagaa
3601 gtgaccctgc tccagtatgt agatgacctc ctcttggcgg cccccacaaa gaaagcctgc
3661 acgcaaggta ctaggcatct actccaggaa ctaggtgaga aaggataccg ggcatctgcc
3721 aagaaggcac aaatttgtca gaccaaggta acttacctgg ggtacatact gagtgaggga
3781 aaaaggtggc tcacccctgg gcgcatagag actgtggctc gcattccacc gccccggaat
3841 cccagagagg tgcgtgaatt cctgggaact gctgggttct gtcgcttgtg gatacccggt
3901 tttgctgaat tggccgcccc cctttacgca ctcaccaagg aaagcacccc tttcacctgg
3961 cagacagagc atcaattggc ttttgaggca ctaaaaaagg cactcttgtc tgccccagcc
4021 cttgggttac cggacacctc aaagcccttt accctcttcc tggacgaaag gcaagggatt
4081 gccaaaggag tcctgaccca aaaattgggg ccttggaaaa gaccggtagc atacctgtcc
4141 aagaagctgg accctgtggc ggccggctgg cccccatgtc ttcgtatcat ggcagccacc
4201 gctatgctgg tcaaagactc tgctaagtta acccttgggc agccactgac tgttattact
4261 ccacatactc tagaggccat agtgcggcag cccccggacc ggtggataac caacgcacgc
4321 ctaacccact accaggccct cttactggac acggaccgcg tccagtttgg ccctccggtc
4381 accctaaacc ctgctacgct gctgccggta ccagaaaacc aaccaagccc acacgattgt
4441 cggcaagtac tggctgagac ccatggaaca cgagaagacc ttaaagacca agagctccca
4501 gacgcggatc acacctggta cacagacggc agcagttacc ttgactcagg tactcggagg
4561 gcgggagcag cggtagtaga cggacacaat accatttggg cacaatcact acctcctggc
4621 acgtctgcac agaaggctga gttaatagca ctaaccaagg ccctagagct gtccaaggga
4681 aagaaagcta acatttatac tgatagccga tatgcctttg caacggctca tactcatgga
4741 agtatctatg aaagaagagg tctcctaacc tcagaaggaa aggaaatcaa gaacaaagct
4801 gaaataattg ccttattaaa ggcccttttt cttcctcaag aagtggctat aattcactgc
4861 cccgggcatc agaaaggaca ggatccagtc gcagtaggaa acagacaggc tgaccgagtg
4921 gccaggcaag ccgccatggc ggaagtactg accctagcca cagaacctga caacaccagc
4981 cacataacta ttgaacatac ttatacctcc gaagaccagg aagaagcaag agccataggg
5041 gctacagaaa acaaagacac tagaaactgg gaaaaagaag ggaaaatagt ccttccccaa
5101 aaggaagccc tggcaatgat ccagcagatg catgcctgga cacacttggg taatcgaaag
5161 ctaaaattgt taattgaaaa aactgacttt ctaatcccaa gggcaagtac actcatagag
5221 caagtgacat ctgcctgtaa ggtctgtcag caggtaaacg ctggggctac ccgagtgcca
5281 gcagggaaac ggactcgtgg taaccgcccg ggagtctatt gggaaataga cttcactgaa
5341 gtaaaacctc actatgctgg gtataagtac ttactagtgt ttgtagatac cttttcagga
5401 tgggtagaag cctttcccac ccggcaagaa acggcacaca tagtagccaa gaagatccta
5461 gaagaaatct ttcctagatt tggacttccc aaggtaattg ggtcagacaa cgggccggcc
5521 ttcgtttccc aggtaagtca ggggctagcc aggatactgg ggattaattg gaaattgcat
5581 tgtgcttata gaccccagag ctcaggacag gtagagagaa tgaatagaac aataaaagag
5641 acccttacta aattgacctt agagactggc ttaaaagatt ggagacgcct cctatctcta
5701 gctctattaa gagcccggaa tacgcctaac cgctttgggc tcactccata tgaaatcctc
5761 tatggaggac ctcccccttt gtcaacctta cttaactcct tttctccctc caattctaag
5821 actgacctac aggcccggct aaaaggacta caagcagtac aggcccaaat ctgggccccc
5881 ttggcagaac tgtaccggcc aggacattcg cagaccagcc accccttcca ggtgggggac
5941 tccgtctacg ttagacgaca ccgttctcag ggactggagc ctcggtggaa aggaccctac
6001 attgttctcc tgaccacacc cacagccata aaggttgacg gaatcgccac gtggattcac
6061 gcatcccacg ccaaggctgc tccagggacg cctggaccga cgtcgtccgg aacttggaga
6121 ctccgccgct ccgaggaccc ccttaagata agactctcac gcacttgact tcttacttgc
6181 ccttgtcctc ctaccccgcg ccgtacatag cagtaacccc tcatatagtc caagatggga
6241 ttcacaacaa agataatctt cttatacaac ctagtactgg tctacgcggg gtttgacgac
6301 cctcgcaaag ccatagaact agtacaaaag cgatatggcc gaccatgcga ttgcagcgga
6361 ggacaagtgt ccgagccccc gtcagacagg gtcagtcaag tgacttgctc aggcaagaca
6421 gcttacttaa tgcccgacca aagatggaaa tgtaagtcaa ttccaaaaga cacctcccca
6481 agcgggccac tccaagagtg cccctgtaat tcttaccagt cctcagtaca cagttcttgt
6541 tatacctcat accaacaatg cagatcaggc aataagacat attatacggc tactctgcta
6601 aaaacacaaa ctgggggcac cagtgatgta caagtattag gatccaccaa caaacttata
6661 caatctccct gtaatggcat aaaagggcag tctatttgct ggagcactac agctcctatc
6721 cacgtctctg atggaggagg tccattagac accacaagaa ttaaaagtgt tcagagaaaa
6781 ctggaagaaa ttcataaagc cctatatcct gaacttcagt atcacccttt ggccatacct
6841 aaggttagag ataacctcat ggtcgatgcc cagactttaa acattctcaa tgccacttac
6901 aacttactcc taatgtccaa cacgagccta gtggacgact gttggctttg tttaaaatta
6961 ggtcccccta ctcccctcgc aatacctaac ttcctattat cctacgtgac tcgctcctcg
7021 gataatatct cttgtttaat aattcccccc cttctagttc aaccgatgca gttttccaat
7081 tcatcttgcc tcttttcccc ctcctacaac agtacagaag aaatagatct aggccatgtt
7141 gccttcagca actgtacctc cataaccaat gtcaccggtc ccatatgcgc tgtaaatggt
7201 tcggtctttc tctgtggcaa taacatggca tacacttatc tacccacgaa ctggacgggg
7261 ctttgcgtcc tagcaactct cctccccgac attgacatca ttcccggaga tgaaccggtc
7321 cccatccctg ctattgatca ttttatatat agacctaaac gggccataca gtttattcct
7381 ttactagcag ggctagggat caccgcagcc ttcacaacag gagctacagg cctaggtgtc
7441 tctgtgaccc aatatacaaa attatctaat cagctaattt ctgatgtaca aatcttatct
7501 agcaccatac aagatctgca agatcaagta gactcattag ccgaagtggt tctccagaac
7561 agaagggggc tagatctact tacagcagaa caaggaggaa tctgtttagc cctgcaagaa
7621 aaatgctgct tttatgttaa caagtcaggg attgtgagag acaaaataaa aaccttacaa
7681 gaagaactag aaagacgtag aaaagatcta gcttccaacc cactttggac tgggcttcaa
7741 gggctcctcc cttacctcct gccctttctt ggccctctac ttaccctcct gctcttactc
7801 accattgggc cgtgcatttt taaccgtcta accgctttta ttaatgataa gttaaacata
7861 atacacgcta tggtgctaac ccaacagtat caggtgctca gaaccgatga agaagctcaa
7921 gattgagcct ctaagacaca agaaaagggg gaaaatgaaa agtaaaactt ttaggccctc
7981 cccgtaaatg gttctgtttg ttcgtggcgc aggcagagtt tgttgcaagg cttgatgtaa
8041 gactcgttac taaatgatta actgcctttg ttctgcttct gtaaaactgc tttcccgccc
8101 tccgaattgt aaaacaagcc ctgcctcagc cggaaattcc aaaccagtat gctaaaggtg
8161 gcggggcccg accgctgcaa cccagaccca aggttgcatc agcgaaggaa aactgcattc
8221 cccagacctc cccggggcta gcacctatcc cacccctttg cgtcgccaaa tagaaaaaga
8281 cacctggcct cgaggttacg aaagaggcca atcaatagcc tgtatgcaaa taaagcctaa
8341 acgctataaa agagatgtat cgccacaaat cggggctctc tctctctcta ccacattcct
8401 tagagggagg gccctggtgc accagtaaac gactttctgc cgaaatttgt gtgttgggtg
8461 gttcctcgcg ccgactctca aaccctaagg aacgtgattc taacatc
//