GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS ROBOBRVP1 3302 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Bovine rotavirus mRNA for gene 1 encoding VP1
ACCESSION X55444
KEYWORDS VP1 gene; inner capsid shell protein.
SOURCE Bovine rotavirus RNA.
ORGANISM Bovine rotavirus
Viridae; ds-RNA nonenveloped viruses; Reoviridae.
REFERENCE 1 (bases 1 to 3302)
AUTHORS McCrae,M.A.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 3302)
AUTHORS Tarlow,O. and McCrae,M.A.
TITLE Nucleotide sequence of gene 1 of the UK tissue culture adapted
strain of bovine rotavirus
JOURNAL Nucleic Acids Res. 18, 7150-7150 (1990)
STANDARD full automatic
COMMENT *source: strain=UKtc; library=cDNA;
From EMBL entry REOBRVP1; dated 10-DEC-1990.
FEATURES Location/Qualifiers
mRNA <1..>3302
/gene="gene 1"
mat_peptide 19..3282
/product="VP1"
/gene="gene 1"
CDS 19..3285
/product="VP1"
/gene="gene 1"
/codon_start=19
BASE COUNT 1209 a 508 c 639 g 946 t
ORIGIN
1 ggctattaaa gctatacaat ggggaagtat aatctaatct tgtcagaata tttatcattc
61 atatataatt cacaatccgc agttcaaatt ccaatttact attcttccaa tagtgaatta
121 gaagatagat gtattgaatt tcattctaaa tgcttagaga actcaaagaa tggacgatca
181 ctaaaaaaac tttttactga atacagcgat gttatagaga atgctacatt actgtcaata
241 ttatcatact cttatgataa atataacgct gttgaaagga aattggtgaa atatgcaaaa
301 ggtaagccgc tagaagcagg cttgacagtg aatgaattag attatgaaaa taacaagata
361 acatctgaac ttttcccaac agcagaagaa tacactgatt cattgatgga tccagcaatc
421 ctaacttcat tgtcatcaaa tttaaatgca gttatgtttt ggttggaaaa gcatgaaaat
481 gatgttgccg aaaaacttaa aatttacaaa aggagattgg atttatttac tatagtagct
541 tcaacagtaa ataaatatgg tgtaccaagg cataatgcga aatatagata tgaatatgaa
601 gtaatgaaag ataagccata ttacttagtg acatgggcga attcttcaat tgaaatgctg
661 atgtcagttt tttctcatga agattattta attgcgagag aattgatagt actatcatat
721 tctaacagat cgactctggc aaagctggtg tcatcaccga tgtcaattct agtagcttta
781 gtggacataa atggaacatt tattacaaat gaagaattag aactagagtt ttcaaataaa
841 tatgtgcggg caatagtccc agatcaaaca ttcgatgaat taaaacagat gcttgacaac
901 atgaggaaag ctgggttaac tgatatacct aagatgatac aggagtggtt ggttgattgt
961 tctattgaaa aatttccact gatggctaaa atatattcgt ggtcatttca tgtcgggttc
1021 agaaagcaga aaatgttgga tgccgcacta gatcaactaa aaactgagta tacagaggat
1081 gtagacgatg aaatgtatcg agaatataca atgctaataa gagatgaggt tgtgaaaatg
1141 cttgaggaac cagtaaagca tgacgatcat ttgttacagg attctgaact agctggttta
1201 ctgtcgatgt catcagcgtc gaatggcgaa tcaaggcaac taaaatttgg tagaaagacg
1261 attttctcga ctaaaaagaa catgcacgtg atggatgaca tggctaatgg aagatatacg
1321 ccaggtataa taccaccagt gaatgtcgat aaaccgatac cattaggaag gagagatgta
1381 ccaggaagac ggactagaat aatatttatc ttaccatatg aatatttcat agcacaacat
1441 gctgtagttg aaaaaagtgt aatctatgcg aaacatacta gagaatatgc tgaattctac
1501 tcacagtcaa atcagttact atcttatggt gatgttacac gctttttatc caataacgct
1561 atggtgctat atacagacgt ctcccaatgg gattcatctc aacataatac gcagccattt
1621 aggaaaggga taataatggg attggacatg ttagctaaca tgactaatga tgctagagtt
1681 attcagacac taaatttgta taagcagaca caaataaacc tgatggattc atacgttcaa
1741 ataccagatg gtaatgttat taaaaagata cagtatggag ctgtagcgtc aggagagaag
1801 cagacaaaag cagcaaattc aatagcgaat ttagcattga ttaagactgt cttatcacgt
1861 atttccaaca aatattcatt cgcgacgaaa ataataagag tcgacggaga cgacaattac
1921 gcagtgttgc agtttaatac agaagtaacc aagcaaatgg ttcaagacgt atcaaacgac
1981 gtgagagaaa cgtatgcgcg aatgaatgct aaagttaagg ccttagtatc cacagtggga
2041 atagaaatag ctaagaggta tattgcaggt ggaaaaatat tcttcagggc tggaataaat
2101 ttactgaata atgaaaagag aggacaaagt acacagtggg atcaagcagc tgttctatat
2161 tcaaactata ttgtgaatag gcttcgagga ttcgaaactg atagagagtt cattttgact
2221 aaaataatgc aaatgacgtc agttgctatt actggatcgt tgagactctt tccttctgaa
2281 cgcgtgttaa ccacgaactc tacattcaaa gtgtttgatt cggaggactt tattatagaa
2341 tatgggacaa ctgatgacga agtatacata caaagagcgt tcatgtcttt gtcgagtcag
2401 aagtcgggaa tagctgatga gatagctgca tcatcaacat ttaagaatta tgtgtctaaa
2461 ttatctgagc agttgttgtt ttcaaagaat aacatagtgt caagaggaat agcattgact
2521 gaaaaggcga agttaaactc atacgcacca atatcacttg agaaaagacg tgcacagata
2581 tcagctttac tgactatgct acaaaaaccg gtcactttta aatcaagtaa aataacaata
2641 aatgatatac ttagagatat aaagccattt tttactgtaa gtgaagcgca cttaccgata
2701 caatatcaaa aatttatgcc aactttacca gacaatgtac aatatataat tcagtgtata
2761 ggatccagaa cctatcaaat tgaagatgac ggctcgaaat cagccatatc tcggctaata
2821 tcaaaatact cagtttataa accgtcaatt gaagagttat ataaagtaat ttcactacac
2881 gagaatgaaa tacaactgta tttaatctca ctgggcatac cgaaaataga cgctgatacg
2941 tacgtcggat caaaaattta ttctcaagat aaatacagga tattggagtc gtatgtgtat
3001 aacttgttgt ctattaatta tggatgttat caactatttg actttaattc accagatcta
3061 gaaaagctga ttagaatacc atttaaagga aagataccag ctgttacttt tatactgcat
3121 ttatatgcta agctagaagt tataaattat gccattaaaa atgggtcatg gataagtttg
3181 ttctgtaact acccaaaatc ggaaatgata aagttatgga agaaaatgtg gaacattacg
3241 tcattacgtt caccgtatac caatgcgaac ttctttcaag attagagcgc ttagatgtga
3301 cc
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