GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS PCSSSV1 5779 bp ds-DNA VRL 28-MAY-1991 DEFINITION Simian sarcoma virus proviral sequence with genes coding for envelope protein (env) and polymerase (pol). ACCESSION V01201 KEYWORDS coat protein; genome; integration site; overlapping genes; terminal repeat. SOURCE Simian sarcoma virus DNA. ORGANISM Simian sarcoma virus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Retroviridae; Oncovirinae; Type C oncovirus group; Mammalian type C oncoviruses. REFERENCE 1 (bases 3443 to 5779) AUTHORS Devare,S.G., Reddy,E.P., Robbins,K.C., Andersen,P.R., Tronick,S.R. and Aaronson,S.A. TITLE Nucleotide sequence of the transforming gene of simian sarcoma virus JOURNAL Proc. Natl. Acad. Sci. U.S.A. 79, 3179-3182 (1982) STANDARD full automatic REFERENCE 2 (bases 1 to 5579) AUTHORS Devare,S.G., Reddy,E.P., Law,J.D., Robbins,K.C. and Aaronson,S.A. TITLE Nucleotide sequence of the simian sarcoma virus genome: Demonstration that its aquired sequences encode the transforming gene product p28sis JOURNAL Proc. Natl. Acad. Sci. U.S.A. 80, 731-735 (1983) STANDARD full automatic COMMENT SWISS-PROT; P01128; TSIS$SMSAV. SWISS-PROT; P03359; POL$SMSAV. SWISS-PROT; P03384; ENV$SMSAV. From EMBL entry RESSV1; dated 13-JUL-1983. FEATURES Location/Qualifiers cellular 1..417 /note="cellular sequence from Rattus norvegicus" CDS 1131..2933 /note="coding sequence of p15 and p12" /codon_start=1131 CDS 2891..3772 /note="coding sequence of pol" /codon_start=2891 CDS 3657..4469 /note="coding sequence of env" /codon_start=3657 CDS 4817..5047 /note="coding sequence of p15E" /codon_start=4817 cellular 5597..5779 /note="cellular sequence from Rattus norvegicus" BASE COUNT 1413 a 1574 c 1532 g 1260 t ORIGIN 1 gaattcttgg caaccgaagt gctcagtcca acttcaatga tttattttag ataagagact 61 cctcatttca gtttagagtc caattaagca acaaagtttt aagagcagtc acataatgtc 121 aataaaagca gaggtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtatg 181 tgtgtatgtg tgtgtgctcc ttaatgatcc attctttcat ttccatgctg tagggagtgc 241 aggtgcatgt aaatgttgtg tggggagagg gaacacatta caggattaca cttgaaacta 301 aggagacaga ccccacctct gggttacagt gaaaagttta gtggttaaaa acattttaat 361 aaaagtcagt ggacttccct ttactccaga aacacagcca atcatgcccc aggatgttac 421 tagaacccct cagtaattga aggaagtgtt tttcaagcta gctgcagtaa cgccattttg 481 caaggcacgg aaaattaccc tggtaaaaag cccaaagcat aggggaagta cagctaaagg 541 tcaagtcgag aaaaacaagg agaacagggc caaacaggat atctgtggtc atgcctgggc 601 cggcccaggg ccaaagacag atggttccca gaaatagatg agtcaacagc agtttctagg 661 gtgcccctca actgtttcaa gaactcccac atgaccggag ctcacccctg gccttatttg 721 aactgaccaa ttaccttgct tctcgcttct gtacccgcgc tttttgctat aaaatgagct 781 cagaaactcc actcggcgcg ccagtcctcc gagagactga gtcgcccggg tacctgtgtg 841 ttcaataaaa cctcttgcta tttgcatccg aagccgtggt ctcgttgttc cttgggaggg 901 tctctcctaa ctgattgact gcccacctcg ggggtctctc atttgggggc tcgtccggga 961 tcggagaccc ccacccaggg accaccgacc caccaacggg aggtaagctg gccagcgatc 1021 gctctgtgtc tcgcttctgt gtctaactcc gtaactctga ctgtccctct gagtgcgcgc 1081 attttggttt cagtttgttc cgggctgatc gctctgtgag cgacgtgtga gtagcgagca 1141 gacgtgttcg gggggctcac cgcccggtaa tcctgggaga cgtcccagga tcaggggagg 1201 accagggacg cctggtggac ccctcggcag aggatcattg tgttctgatc ccaccgccgc 1261 gtctagagag gcgcgctctg ccatctgact ctttctcttg cctctacgct actcgatctc 1321 gccgccgttt ctggtttctt tttgttttgt ttctgataag cctctgtgtc ggagtttctc 1381 tcttcgaaat cttcgaaatg ggacaaaata actctacccc tctctccctt actctaggtc 1441 actggaaaga tgtgagaaca agggctcaca atctgtccgt gaaaatcaga aaggaaaaat 1501 ggcagacttt ctgttcctcc gagtggccca cattcggcgt ggggtggccg ccggagggaa 1561 cttttaatct ctctgtcatt tttgcagtta aaaggattgt ctttcaggaa accggaggac 1621 acccggacca agttccatac atcgtggtgt ggcaggacct cgcccagagt cccccaccat 1681 gggtgccgcc ctccgccaag atcgctgttg tctctagtcc agagaacact caaggaccat 1741 ctgcggggag gccatccgct cctccccgac cccccatcta cccggcaaca gacgacttgc 1801 tccttctctc tgagcccccg ccctatccgg cggccctgcc acctcctctg gcccctccgg 1861 cggtcggacc ggcgccgggc caggcgcccg atagttccga tcctgaggga ccagccgcgg 1921 ggaccaggag tcgccgtgcc cgcagtccgg cagacgactc gggtcctgac tccactgtga 1981 ttttgcccct ccgagccata ggacccccgg ccgagcccaa cggcctagtg cctctacaat 2041 attggccttt ttcctcagca gatctttata attggaaatc taaccatcct tccttttctg 2101 aaaatccagc aggactcacg gggctccttg agtctcttat gttttctcat cagcccactt 2161 gggacgattg ccaacagctc ctacagattc tcttcaccac tgaggagcgg gaaaggattc 2221 tcctggaggc ccgcaagaat gtccttgggg acaacggggc ccctactcaa ctcgagaacc 2281 tcattaatga ggccttcccc ctcaatcgac ctcagtggga ttacaacacg gccgcaggta 2341 gggagctgct cctggtctac cgccggactc tagtggcagg tctcaaaggg gcagctcggc 2401 gccccactaa tttggctaag gtaagagagg tcttgcaggg accggcagaa cccccttcgg 2461 ttttcttaga acgcctaatg gaggcctata ggagatacac tccgtttgac ccctcagaag 2521 aggggcagca ggctgcggtt gccacggcct tcaccggaca gtcagcccca gatatcaaga 2581 aaaagttaca gaggctagag gggctccaag attattcctt acaagattta gtgagagagg 2641 cagagaaggt gtaccacaag agagagacag aagaagaaag acaagaaaga gaaaagaaag 2701 aggcagaaga gagagagagg cggcgcgata ggcgtcaaga gaaaaactta actaggattt 2761 tggccgcagt ggtaagtgaa ggagggtctg gagataggcg gacagggaac ctaggcaacc 2821 gggcaaggaa gacacctagg gatggaagac ctcctctaga caaagaccag tgcgcgtact 2881 gtaaagagaa gggtcactgg gacgaggaga tcgccccggc gtgtactggg aggtagactt 2941 cacagaagtg aagcctggcc ggtatggaaa caggtatctg ctggtattca tagatacttt 3001 ttccggatgg gtagaagctt ttcctaccaa aactgaaacg gccctgaccg tctgcaagag 3061 aaattctacc ccgcttcgga tccctaaggt actcgggtca gacaatggcc cagcctttgt 3121 tgctcaggta agtcagggac tggccactca actggggata aattggaagt tacattgtgc 3181 gtatagaccc cagagctcag gtcaggtaga gagaatgaac aggacaatca aggagacctt 3241 gaccaaatta gccttagaga ccggtggaaa agactgggtg gccctccttc ccttagcgct 3301 gctcagagcc aagaataccc ctagccggtt tggtctaact ccttatgaaa ttctctatgg 3361 gggaccgccc cccatacttg agtctggagg gacattgggt cccgatgata attttctccc 3421 tgtcttattt actcatttaa aggctttaga agttgtgagg acccagatct gggaccagat 3481 caaggaggtg tacaagcccg gtaccgtggc aatcccccac ccgttccagg tcggggacca 3541 agtgcttgtc agacgccatc gacccggcag ccttgagcct cggtggaaag gcccgtacct 3601 ggtgttgctg accaccccga ccgcggtaaa agtcgacggt atcgctgcct gggtccatgc 3661 ttctcacctc aagcctgcac caccctcggc accagatgag tcctgggagc tggaaaaagc 3721 tgatcatcct cttaagctgc gtattcggcg gcggcggaac gagtctgcaa aataaaaacc 3781 cccaccagcc tatgaccctc acctggcagg gggaccccat tcctgaggag ctctataaga 3841 tgctgagtgg ccactcgatt cgctccttcg atgacctcca gcgcctgctg cagggagact 3901 ccggaaaaga agatggggct gagctggacc tgaacatgac ccgctcccat tctggtggcg 3961 agctggagag cttggctcgt gggaaaagga gcctgggttc cctgagcgtt gccgagccag 4021 ccatgattgc cgagtgcaag acacgaaccg aggtgttcga gatctcccgg cgcctcatcg 4081 accgcaccaa tgccaacttc ctggtgtggc cgccctgcgt ggaggtgcag cgctgctccg 4141 gctgttgcaa caaccgcaac gtgcagtgcc ggcccaccca agtgcagctg cggccagtcc 4201 aggtgagaaa gatcgagatt gtgcggaaga agccaatctt taagaaggcc acggtgacgc 4261 tggaggacca cctggcatgc aagtgtgaga tagtggcagc tgcacgggct gtgacccgaa 4321 gcccggggac ttcccaggag cagcgagcca aaacgaccca aagtcgggtg accatccgga 4381 cggtgcgagt ccgccggccc cccaagggca agcaccggaa atgcaagcac acgcatgaca 4441 agacggcact gaaggagacc ctcggagcct aagggcatcg gcaggagaat atgggcagcg 4501 ggtctcctgc cagcggcctc cagcatcttg cccagcagct caagaagaga aaaaaggact 4561 gaactccacc accatcttct tcccttaact ccaaaaactt gaaataagag tgtgaaagag 4621 actgataggg tcgctgtttg aaaaaaactg gctccttcct ctgcacctgg cctgggccac 4681 acccaagtgc tgtggactgg cccgaggggc cctgcacgtg gccctgagca cctctcagcg 4741 tagcctgcct agtccctaga cccctagcca gctccaaggg gaggcacctc caagcaggcc 4801 aggctacctc gggggtctag agcgccagaa gaaccaaaac tggtatgaag ggtggttcaa 4861 tagctcccct tggttcacta ccctactatc aaccatcgcc gggcccctat tactcctcct 4921 tctgttgctc attctcgggc cctgcatcat caataggtta gtccaattca tcaataatag 4981 agtaagtgca gttaaaattc tggtccttag acagaaatat cagaccctag ataacgaaga 5041 taacctttga ttccgctcta agattagagc tatccacaag agaaatgggg gaatgaagga 5101 agtgtttttc aagctagctg cagtaacgcc attttgcaag gcacggaaat taccctggta 5161 aaaagcccaa agcatagggg aagtacagct aaaggtcaag tcgagaaaaa caaggagaac 5221 agggccaaac aggatatctg tggtcatgcc tgggccggcc cagggccaaa gacagatggt 5281 tcccagaaat agatgagtca acagcagttt ctagggtgcc cctcaactgt ttcaagaact 5341 cccacatgac cggagctcac ccctggcctt atttgaactg accaattacc ttgcttctcg 5401 cttctgtacc cgcgcttttt gctataaaat gagctcagaa actccactcg gcgcgccagt 5461 cctccgagag actgagtcgc ccgggtacct gtgtgttcaa taaaacctct tgctatttgc 5521 atccgaagcc gtggtctcgt tgttccttgg gagggtctct cctaactgat tgactgccca 5581 cctcgggggt ctctcataat gagctagagg taggctgaca ctaggtctat aatgcctaga 5641 tatggtcaga gatggaatat tctgcataaa gaaataggca gtaccactag ctgtatgccc 5701 aacacagaag agaacgcagg atccagcatg gatctctcct cctcccccaa ctcatgtagt 5761 ccaggatcct cttgaattc //