GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS PCSSSV1 5779 bp ds-DNA VRL 28-MAY-1991
DEFINITION Simian sarcoma virus proviral sequence with genes coding for
envelope protein (env) and polymerase (pol).
ACCESSION V01201
KEYWORDS coat protein; genome; integration site; overlapping genes;
terminal repeat.
SOURCE Simian sarcoma virus DNA.
ORGANISM Simian sarcoma virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Retroviridae; Oncovirinae; Type C oncovirus group;
Mammalian type C oncoviruses.
REFERENCE 1 (bases 3443 to 5779)
AUTHORS Devare,S.G., Reddy,E.P., Robbins,K.C., Andersen,P.R., Tronick,S.R.
and Aaronson,S.A.
TITLE Nucleotide sequence of the transforming gene of simian sarcoma
virus
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 79, 3179-3182 (1982)
STANDARD full automatic
REFERENCE 2 (bases 1 to 5579)
AUTHORS Devare,S.G., Reddy,E.P., Law,J.D., Robbins,K.C. and Aaronson,S.A.
TITLE Nucleotide sequence of the simian sarcoma virus genome:
Demonstration that its aquired sequences encode the transforming
gene product p28sis
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 80, 731-735 (1983)
STANDARD full automatic
COMMENT SWISS-PROT; P01128; TSIS$SMSAV. SWISS-PROT; P03359; POL$SMSAV.
SWISS-PROT; P03384; ENV$SMSAV.
From EMBL entry RESSV1; dated 13-JUL-1983.
FEATURES Location/Qualifiers
cellular 1..417
/note="cellular sequence from Rattus norvegicus"
CDS 1131..2933
/note="coding sequence of p15 and p12"
/codon_start=1131
CDS 2891..3772
/note="coding sequence of pol"
/codon_start=2891
CDS 3657..4469
/note="coding sequence of env"
/codon_start=3657
CDS 4817..5047
/note="coding sequence of p15E"
/codon_start=4817
cellular 5597..5779
/note="cellular sequence from Rattus norvegicus"
BASE COUNT 1413 a 1574 c 1532 g 1260 t
ORIGIN
1 gaattcttgg caaccgaagt gctcagtcca acttcaatga tttattttag ataagagact
61 cctcatttca gtttagagtc caattaagca acaaagtttt aagagcagtc acataatgtc
121 aataaaagca gaggtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtatg
181 tgtgtatgtg tgtgtgctcc ttaatgatcc attctttcat ttccatgctg tagggagtgc
241 aggtgcatgt aaatgttgtg tggggagagg gaacacatta caggattaca cttgaaacta
301 aggagacaga ccccacctct gggttacagt gaaaagttta gtggttaaaa acattttaat
361 aaaagtcagt ggacttccct ttactccaga aacacagcca atcatgcccc aggatgttac
421 tagaacccct cagtaattga aggaagtgtt tttcaagcta gctgcagtaa cgccattttg
481 caaggcacgg aaaattaccc tggtaaaaag cccaaagcat aggggaagta cagctaaagg
541 tcaagtcgag aaaaacaagg agaacagggc caaacaggat atctgtggtc atgcctgggc
601 cggcccaggg ccaaagacag atggttccca gaaatagatg agtcaacagc agtttctagg
661 gtgcccctca actgtttcaa gaactcccac atgaccggag ctcacccctg gccttatttg
721 aactgaccaa ttaccttgct tctcgcttct gtacccgcgc tttttgctat aaaatgagct
781 cagaaactcc actcggcgcg ccagtcctcc gagagactga gtcgcccggg tacctgtgtg
841 ttcaataaaa cctcttgcta tttgcatccg aagccgtggt ctcgttgttc cttgggaggg
901 tctctcctaa ctgattgact gcccacctcg ggggtctctc atttgggggc tcgtccggga
961 tcggagaccc ccacccaggg accaccgacc caccaacggg aggtaagctg gccagcgatc
1021 gctctgtgtc tcgcttctgt gtctaactcc gtaactctga ctgtccctct gagtgcgcgc
1081 attttggttt cagtttgttc cgggctgatc gctctgtgag cgacgtgtga gtagcgagca
1141 gacgtgttcg gggggctcac cgcccggtaa tcctgggaga cgtcccagga tcaggggagg
1201 accagggacg cctggtggac ccctcggcag aggatcattg tgttctgatc ccaccgccgc
1261 gtctagagag gcgcgctctg ccatctgact ctttctcttg cctctacgct actcgatctc
1321 gccgccgttt ctggtttctt tttgttttgt ttctgataag cctctgtgtc ggagtttctc
1381 tcttcgaaat cttcgaaatg ggacaaaata actctacccc tctctccctt actctaggtc
1441 actggaaaga tgtgagaaca agggctcaca atctgtccgt gaaaatcaga aaggaaaaat
1501 ggcagacttt ctgttcctcc gagtggccca cattcggcgt ggggtggccg ccggagggaa
1561 cttttaatct ctctgtcatt tttgcagtta aaaggattgt ctttcaggaa accggaggac
1621 acccggacca agttccatac atcgtggtgt ggcaggacct cgcccagagt cccccaccat
1681 gggtgccgcc ctccgccaag atcgctgttg tctctagtcc agagaacact caaggaccat
1741 ctgcggggag gccatccgct cctccccgac cccccatcta cccggcaaca gacgacttgc
1801 tccttctctc tgagcccccg ccctatccgg cggccctgcc acctcctctg gcccctccgg
1861 cggtcggacc ggcgccgggc caggcgcccg atagttccga tcctgaggga ccagccgcgg
1921 ggaccaggag tcgccgtgcc cgcagtccgg cagacgactc gggtcctgac tccactgtga
1981 ttttgcccct ccgagccata ggacccccgg ccgagcccaa cggcctagtg cctctacaat
2041 attggccttt ttcctcagca gatctttata attggaaatc taaccatcct tccttttctg
2101 aaaatccagc aggactcacg gggctccttg agtctcttat gttttctcat cagcccactt
2161 gggacgattg ccaacagctc ctacagattc tcttcaccac tgaggagcgg gaaaggattc
2221 tcctggaggc ccgcaagaat gtccttgggg acaacggggc ccctactcaa ctcgagaacc
2281 tcattaatga ggccttcccc ctcaatcgac ctcagtggga ttacaacacg gccgcaggta
2341 gggagctgct cctggtctac cgccggactc tagtggcagg tctcaaaggg gcagctcggc
2401 gccccactaa tttggctaag gtaagagagg tcttgcaggg accggcagaa cccccttcgg
2461 ttttcttaga acgcctaatg gaggcctata ggagatacac tccgtttgac ccctcagaag
2521 aggggcagca ggctgcggtt gccacggcct tcaccggaca gtcagcccca gatatcaaga
2581 aaaagttaca gaggctagag gggctccaag attattcctt acaagattta gtgagagagg
2641 cagagaaggt gtaccacaag agagagacag aagaagaaag acaagaaaga gaaaagaaag
2701 aggcagaaga gagagagagg cggcgcgata ggcgtcaaga gaaaaactta actaggattt
2761 tggccgcagt ggtaagtgaa ggagggtctg gagataggcg gacagggaac ctaggcaacc
2821 gggcaaggaa gacacctagg gatggaagac ctcctctaga caaagaccag tgcgcgtact
2881 gtaaagagaa gggtcactgg gacgaggaga tcgccccggc gtgtactggg aggtagactt
2941 cacagaagtg aagcctggcc ggtatggaaa caggtatctg ctggtattca tagatacttt
3001 ttccggatgg gtagaagctt ttcctaccaa aactgaaacg gccctgaccg tctgcaagag
3061 aaattctacc ccgcttcgga tccctaaggt actcgggtca gacaatggcc cagcctttgt
3121 tgctcaggta agtcagggac tggccactca actggggata aattggaagt tacattgtgc
3181 gtatagaccc cagagctcag gtcaggtaga gagaatgaac aggacaatca aggagacctt
3241 gaccaaatta gccttagaga ccggtggaaa agactgggtg gccctccttc ccttagcgct
3301 gctcagagcc aagaataccc ctagccggtt tggtctaact ccttatgaaa ttctctatgg
3361 gggaccgccc cccatacttg agtctggagg gacattgggt cccgatgata attttctccc
3421 tgtcttattt actcatttaa aggctttaga agttgtgagg acccagatct gggaccagat
3481 caaggaggtg tacaagcccg gtaccgtggc aatcccccac ccgttccagg tcggggacca
3541 agtgcttgtc agacgccatc gacccggcag ccttgagcct cggtggaaag gcccgtacct
3601 ggtgttgctg accaccccga ccgcggtaaa agtcgacggt atcgctgcct gggtccatgc
3661 ttctcacctc aagcctgcac caccctcggc accagatgag tcctgggagc tggaaaaagc
3721 tgatcatcct cttaagctgc gtattcggcg gcggcggaac gagtctgcaa aataaaaacc
3781 cccaccagcc tatgaccctc acctggcagg gggaccccat tcctgaggag ctctataaga
3841 tgctgagtgg ccactcgatt cgctccttcg atgacctcca gcgcctgctg cagggagact
3901 ccggaaaaga agatggggct gagctggacc tgaacatgac ccgctcccat tctggtggcg
3961 agctggagag cttggctcgt gggaaaagga gcctgggttc cctgagcgtt gccgagccag
4021 ccatgattgc cgagtgcaag acacgaaccg aggtgttcga gatctcccgg cgcctcatcg
4081 accgcaccaa tgccaacttc ctggtgtggc cgccctgcgt ggaggtgcag cgctgctccg
4141 gctgttgcaa caaccgcaac gtgcagtgcc ggcccaccca agtgcagctg cggccagtcc
4201 aggtgagaaa gatcgagatt gtgcggaaga agccaatctt taagaaggcc acggtgacgc
4261 tggaggacca cctggcatgc aagtgtgaga tagtggcagc tgcacgggct gtgacccgaa
4321 gcccggggac ttcccaggag cagcgagcca aaacgaccca aagtcgggtg accatccgga
4381 cggtgcgagt ccgccggccc cccaagggca agcaccggaa atgcaagcac acgcatgaca
4441 agacggcact gaaggagacc ctcggagcct aagggcatcg gcaggagaat atgggcagcg
4501 ggtctcctgc cagcggcctc cagcatcttg cccagcagct caagaagaga aaaaaggact
4561 gaactccacc accatcttct tcccttaact ccaaaaactt gaaataagag tgtgaaagag
4621 actgataggg tcgctgtttg aaaaaaactg gctccttcct ctgcacctgg cctgggccac
4681 acccaagtgc tgtggactgg cccgaggggc cctgcacgtg gccctgagca cctctcagcg
4741 tagcctgcct agtccctaga cccctagcca gctccaaggg gaggcacctc caagcaggcc
4801 aggctacctc gggggtctag agcgccagaa gaaccaaaac tggtatgaag ggtggttcaa
4861 tagctcccct tggttcacta ccctactatc aaccatcgcc gggcccctat tactcctcct
4921 tctgttgctc attctcgggc cctgcatcat caataggtta gtccaattca tcaataatag
4981 agtaagtgca gttaaaattc tggtccttag acagaaatat cagaccctag ataacgaaga
5041 taacctttga ttccgctcta agattagagc tatccacaag agaaatgggg gaatgaagga
5101 agtgtttttc aagctagctg cagtaacgcc attttgcaag gcacggaaat taccctggta
5161 aaaagcccaa agcatagggg aagtacagct aaaggtcaag tcgagaaaaa caaggagaac
5221 agggccaaac aggatatctg tggtcatgcc tgggccggcc cagggccaaa gacagatggt
5281 tcccagaaat agatgagtca acagcagttt ctagggtgcc cctcaactgt ttcaagaact
5341 cccacatgac cggagctcac ccctggcctt atttgaactg accaattacc ttgcttctcg
5401 cttctgtacc cgcgcttttt gctataaaat gagctcagaa actccactcg gcgcgccagt
5461 cctccgagag actgagtcgc ccgggtacct gtgtgttcaa taaaacctct tgctatttgc
5521 atccgaagcc gtggtctcgt tgttccttgg gagggtctct cctaactgat tgactgccca
5581 cctcgggggt ctctcataat gagctagagg taggctgaca ctaggtctat aatgcctaga
5641 tatggtcaga gatggaatat tctgcataaa gaaataggca gtaccactag ctgtatgccc
5701 aacacagaag agaacgcagg atccagcatg gatctctcct cctcccccaa ctcatgtagt
5761 ccaggatcct cttgaattc
//