GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS ACRVARELE 3149 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Reticuloendotheliosis virus strain A pol (3' end) and env genes
ACCESSION X01455
KEYWORDS capsid protein; env gene; glycoprotein; long terminal repeat;
overlapping genes; pol gene; reverse transcriptase.
SOURCE Reticuloendotheliosis virus RNA.
ORGANISM Reticuloendotheliosis virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Retroviridae; Oncovirinae; Type C oncovirus group;
Mammalian type C oncoviruses.
REFERENCE 1 (bases 1 to 3149)
AUTHORS Wilhelmsen,K.C., Eggleton,K. and Temin,H.M.
TITLE Nucleic acid sequences of the oncogene v-rel in
reticuloendotheliosis virus strain T and its cellular homolog, the
proto-oncogene c-rel
JOURNAL J. Virol. 52, 172-182 (1984)
STANDARD full automatic
COMMENT SWISS-PROT; P03360; POL$AVIRE. SWISS-PROT; P03399; ENV$AVIRE.
*source strain=A;
Rev-A is the non-defective helper virus of Rev-T (see REVTREL)
From EMBL entry REVARELE; dated 18-NOV-1986.
FEATURES Location/Qualifiers
CDS <1..1419
/note="C end of pol protein (reverse transcriptase)"
/codon_start=1
misc_feature 814..822
/note="pt. glycosylation site"
misc_feature 877..885
/note="pot. glycosylation site"
misc_feature 1072..1080
/note="pot. glycosylation site"
CDS 1359..3104
/note="env-protein (capsid protein) (aa 1-582)"
/codon_start=1359
misc_feature 2259..2267
/note="pot. glycosylation site"
misc_feature 2298..2306
/note="pot. glycosylation site"
misc_feature 2811..2819
/note="pot. glycosylation site"
misc_feature 3132..>3149
/note="5' end of 3' long terminal repeat (LTR)"
misc_feature 3132..3136
/note="inverted repeat marking LTR"
BASE COUNT 801 a 844 c 821 g 683 t
ORIGIN
1 aaaggggaac tgttgacggc gggggaaaag gctatcaaaa acgcccccga aattctagcc
61 ttgctgaccg cggtctggct acctaaacgg gtagctgtga tgcattgcaa gggacaccag
121 aaagacgatg cacccacatc aactggtaac cgacgggcag atgaggtggc tcgagaagta
181 gctatacgtc ctttgagcac ccaagccacc atctccgatg caccggatat gccagatacc
241 gaaacccctc agtattcgca tgtggaggag gctctaggac atcgactgag ggggaccaaa
301 gactctgctg ggtggtggca ccttcctgac gggcgcctct tgcttcccag agcagtgggg
361 agaaaggtcc tagagcaaac tcacagagcc acacatttgg gtgaatcaaa attgactgag
421 ttagttagaa aacactatcc tatctgtggg atttatcgag cagctagaga tatcaccacc
481 cgctgtgtgg catgtgccca ggtaaaccct agagcagctc ccgtggagaa agggctcaat
541 tcccgcatca gaggtgcggc gccaggggaa cactgggagg tggatttcac agaaatgata
601 acagccaaag gggggtataa atacctgctt gtactggtag acacattctc gggctgggta
661 gaggcatatc cagcaaaaag agaaacctcc caagtggtga ttaagcatct aattcttgat
721 attatcccca ggtttgggtt accggtccag atcgggtccg acaatgggcc ggcctttgtg
781 gcaaaagtga cacagcagtt gtgtgaggcc ctaaatgtct cctggaagct ccattgtgca
841 taccgacctc aaagctcggg acaggtggaa aggatgaacc gaaccctaaa gaaagccatc
901 gctaaattgg aggatagaga caggagggga ctgggtctcc ctcctccctc aggctttgct
961 ccgggcacgg tgtaccccgg gagggaggga ttgtcaccct tcgagatatt atatggtctc
1021 aagcctcctg tagttccccg tgtaggatgt gacaagcttg ccagcataac caaccaaacc
1081 ttgcttaagt ccctacaggc cctccaggct actaggtctc tggctcgggc agctgcgcga
1141 ccaactgccc cagaaagaag ctcagcaaga ccgtacccca ctgtccccaa cctggtgacc
1201 tcgttcttcg ttaagaagca cgacttccag cagttggggc cacggtggga cggaccctac
1261 actgtagtcc taagtacccc caccgcggta aaggccgctg ggaagacccc gtggatccac
1321 tactctcgac tcaagaaagc tcctgacaac caagaagaat ggactgtctc accgacctcc
1381 gatccactga gggtaaagtt gaccaggcgg gcaaaaccct aattcttctt gtggtttggt
1441 gggggtttgg gaccactgcc gagggtcacc ccttgcagca actttgggaa ctgccttgtg
1501 actgctccgg gggatatgtc tcccccgacc tacctattac accaactccc tcgattgcgg
1561 tagcttcacc gctacctgac ttacgggtct ggttgcaggg tagttggggc tggggagggg
1621 gatttagaca acagtgggag tgtgtgttta aacccaagat cataccctct gtgcaggagc
1681 agccagggcc ctgcgaatgc ctcacgatag ccacccaaat gcattccacc tgttacgaaa
1741 aggctcagga atgcaccctc ctgggaaaaa cttattttac tgccatccta cagaaaacaa
1801 agctaggttc gtatgaagac gggcctaata aactgctcca agcctcttgc acgggaatct
1861 gggaaaccag tatgttggga ccccgctgcc cctgtgtatg tctcgatggg ggcggtccca
1921 ctgacagatt cggaagaatc tgtgcggaag gactggagga aatcatcagg cacagctacc
1981 cctccgtaca gtatcaccct ttagccctgc cccgaccaag aggagtagat ctggatcccc
2041 agacgtctga catactggaa gctactcacc aggtccttaa cgccactaat cctcagctag
2101 cagagaactg ctggctttgc atgactcttg gaactcaatc cccgcagcca tcccggcgaa
2161 tggcaatgtc actctcgatg gaaattgcag tcttagcctc cctttcgggt gcaacccacc
2221 gggtcaatag atgtcaactg ctatgcaggg aagcagacaa taggactggt atacccgtag
2281 ggtatgttca tttcactaac tgcactagca tccaagagtc tctaacgaga cgagtcatat
2341 atgaaatctt acgagactat gtcctccacc gggtcatgta tttgtgtgtg gaacaacatg
2401 cctacacggc gctccctaat aaatggatag ggttgtgcat actggcatca atcgtacccg
2461 acatgagcat aatacccggg gaagagccta tcccactccc atccatcgag tacaccgctg
2521 ggcgtcataa gagggcagtc cagtttatcc ccctgcttgt aggtctaggg attacagggg
2581 ctacacttgc tggtggaact ggacttgggg tttccgttca cacttatcac aagctttcta
2641 atcaattgat tgaagatgtc caggctcttt cagggaccat caatgaccta caggaccaga
2701 ttgactccct agctgaggtt gtcttacaaa atagaagggg gttagaccta ttgactgccg
2761 aacaaggagg aatatgtctc gcactccagg agaagtgctg tttttacgcc aacaagtcgg
2821 gtatagtacg tgacaagatc cggaaactcc aggaggacct tctcgcgagg aaacgtgcac
2881 tgtacgacaa ccccctgtgg aacggcttga acggcttcct tccatatttg ctaccctcgt
2941 tgggccccct gtttgggctc atattgttcc tgaccctcgg cccgtgcatc aggaagaccc
3001 tgactcgcat tatccatgac aaaattcagg gcagtaaaaa tcctcgcatt agtcccgcag
3061 tacaagccac tcccaacaga gatggatacc ctaggtcaat ggtttgacca gaacatacaa
3121 gagcagtggg gaatgtggga gggagctct
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