GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS VSVVSVPOL 6380 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Vesicular Stomatitis Virus gene for polymerase (L)
ACCESSION X00939
KEYWORDS polymerase.
SOURCE Vesicular stomatitis virus RNA.
ORGANISM Vesicular stomatitis virus
Viridae; ss-RNA enveloped viruses; Negative strand RNA viruses;
Rhabdoviridae; Vesiculovirus.
REFERENCE 1 (bases 1 to 6380)
AUTHORS Schubert,M., Harmison,G.G. and Meier,E.
TITLE Primary structure of the vesicular stomatitis virus polymerase (L)
gene: evidence for a high frequency of mutations
JOURNAL J. Virol. 51, 505-514 (1984)
STANDARD full automatic
COMMENT SWISS-PROT; P03523; RRPL$VSVSJ.
From EMBL entry RHVSVPOL; dated 28-JAN-1986.
FEATURES Location/Qualifiers
CDS 11..6337
/note="polymerase L (aa 1-2109)"
/codon_start=11
polyA_site 6373..6373
/note="polyadenylation site"
BASE COUNT 2009 a 1227 c 1380 g 1764 t
ORIGIN
1 aacagcaatc atggaagtcc acgattttga gaccgacgag ttcaatgatt tcaatgaaga
61 tgactatgcc acaagagaat tcctgaatcc cgatgagcgc atgacgtact tgaatcatgc
121 tgattacaat ttgaattctc ctctaattag tgatgatatt gacaatttga tcaggaaatt
181 caattctctt ccgattccct cgatgtggga tagtaagaac tgggatggag ttcttgagat
241 gttaacatca tgtcaagcca atcccatctc aacatctcag atgcataaat ggatgggaag
301 ttggttaatg tctgataatc atgatgccag tcaagggtat agttttttac atgaagtgga
361 caaagaggca gaaataacat ttgacgtggt ggagaccttc atccgcggct ggggcaacaa
421 accaattgaa tacatcaaaa aggaaagatg gactgactca ttcaaaattc tcgcttattt
481 gtgtcaaaag tttttggact tacacaagtt gacattaatc ttaaatgctg tctctgaggt
541 ggaattgctc aacttggcga ggactttcaa aggcaaagtc agaagaagtt ctcatggaac
601 gaacatatgc aggattaggg ttcccagctt gggtcctact tttatttcag aaggatgggc
661 ttacttcaag aaacttgata ttctaatgga cccaaacttt ctgttaatgg tcaaagatgt
721 gattataggg aggatgcaaa cggtgctatc catggtatgt agaatagaca acctgttctc
781 agagcaagac atcttctccc ttctaaatat ctacagaatt ggagataaaa ttgtggagag
841 gcagggaaat ttttcttatg acttgattaa aatggtggaa ccgatatgca acttgaagct
901 gatgaaatta gcaagagaat caaggccttt agtcccacaa ttccctcatt ttgaaaatca
961 tatcaagact tctgttgatg aaggggcaaa aattgaccga ggtataagat tcctccatga
1021 tcagataatg agtgtgaaaa cagtggatct cacactggtg atttatggat cgttcagaca
1081 ttggggtcat ccttttatag attattacac tggactagaa aaattacatt cccaagtaac
1141 catgaagaaa gatattgatg tgtcatatgc aaaagcactt gcaagtgatt tagctcggat
1201 tgttctattt caacagttca atgatcataa aaagtggttc gtgaatggag acttgctccc
1261 tcatgatcat ccctttaaaa gtcatgttaa agaaaataca tggcccacag ctgctcaagt
1321 tcaagatttt ggagataaat ggcatgaact tccgctgatt aaatgttttg aaatacccga
1381 cttactagac ccatcgataa tatactctca caaaagtcat tcaatgaata ggtcagaggt
1441 gttgaaacat gtccgaatga atccgaacac tcctatccct agtaaaaagg tgttgcagac
1501 tatgttggac acaaaggcta ccaattggaa agaatttctt aaagagattg atgagaaggg
1561 cttagatgat gatgatctaa ttattggtct taaaggaaag gagagggaac tgaagttggc
1621 aggtagattt ttctccctaa tgtcttggaa attcccagaa tactttgtaa ttaccgaata
1681 tttgataaag actcatttcg tccctatgtt taaaggcctg acaatggcgg acgatctaac
1741 tgcagtcatt aaaaagatgt tagattcctc atccggccaa ggattgaagt catatgaggc
1801 aatttgcata gccaatcaca ttgattacga aaaatggaat aaccaccaaa ggaagttatc
1861 aaacggccca gtgttccgag ttatgggcca gttcttaggt tatccatcct taatcgagag
1921 aactcatgaa ttttttgaga aaagtcttat atactacaat ggaagaccag acttgatgcg
1981 tgttcacaac aacacactga tcaattcaac ctcccaacca gtttgttggc aaggacaaga
2041 gggtggactg gaaggtctac ggcaaaaagg atggactatc ctcaatctac tggttattca
2101 aagagaggct aaaatcagaa acactgctgt caaagtcttg gcacaaggtg ataatcaagt
2161 tatttgcaca cagtataaaa cgaagaaatc gagaaacgtt gtagaattac agggtgctct
2221 caatcaaatg gtttctaata atgagaaaat tatgactgca atcaaaatag ggacagggaa
2281 gttaggactt ttgataaatg acgatgagac tatgcaatct gcagattact tgaattatgg
2341 aaaaataccg attttccgtg gagtgattag agggttagag accaagagat ggtcacgagt
2401 gacttgtgtc accaatgacc aaatacccac ttgtgctaat ataatgagct cagtttccac
2461 aaatgctctc accgtagctc attttgctga gaacccaatc aatgccatga tacagtacaa
2521 ttattttggg acatttgcta gactcttgtt gatgatgcat gatcctgctc ttcgtcaatc
2581 attgtatgaa gttcaagata agataccggg cttgcacagt tctactttca aatacgccat
2641 gttgtatttg gacccttcca ttggaggagt gtcgggcatg tctttgtcca ggtttttgat
2701 tagagccttc ccagatcccg taacagaaag tctctcatcc tggagattca tccatgtaca
2761 tgctcgaagt gagcatctga aggagatgag tgcagtattt ggaaaccccg agatagccaa
2821 gtttcgaata actcacatag acaagctagt agaagatcca acctctctga acatcgctat
2881 gggaatgagt ccagcgaact tgttaaagac tgaggttaaa aaatgcttaa tcgaatcaag
2941 acaaaccatc aggaaccagg tgattaagga tgcaaccata tatttgtatc atgaagagga
3001 tcggctcaga agtttcttat ggtcaataaa tcctctgttc cctagatttt taagtgaatt
3061 caaatcaggc acttttttgg gagtcccaga cggcctcatc agtctatttc aaaattctcg
3121 tactattcgg aactccttta agaaaaagta tcatagggaa ttggatgatt tgattgtgag
3181 gagtgaggta tcctctttga cacatttagg gaaacttcat ttgagaaggg gatcatgtaa
3241 aatgtggaca tgttcagcta ctcatgctga cacattaaga tacaaatcct ggggccgtac
3301 agttattggg acaactgtac cccatccatt agaaatgttg ggtccacaac atcgaaaaga
3361 gactccttgt gcaccatgta acacatcagg gttcaattat gtttctgtgc attgtccaga
3421 cgggatccat gacgtcttta gttcacgggg accattgcct gcttatctag ggtctaaaac
3481 atctgaatct acatctattt tgcagccttg ggaaagggaa agcaaagtcc cactgattaa
3541 aagagctaca cgtcttagag atgctatctc ttggtttgtt gaacccgact ctaaactagc
3601 aatgactata ctttctaaca tccactcttt aacaggcgaa gaatggacca aaaggcagca
3661 tgggttcaaa agaacagggt ctgcccttca taggttttcg acatctcgga tgagccatgg
3721 tgggttcgca tctcagagca ctgcagcatt gaccaggttg atggcaacta cagacaccat
3781 gagggatctg ggagatcaga atttcgactt tttattccaa gcaacgttgc tctatgctca
3841 aattaccacc actgttgcaa gagacggatg gatcaccagt tgtacagatc attatcatat
3901 tgcctgtaag tcctgtttga gacccataga agagatcacc ctggactcaa gtatggacta
3961 cacgccccca gatgtatccc atgtcctgaa gacatggagg aatggggaag gttcgtgggg
4021 acaagagata aaacagatct atcctttaga agccaattgg aagaatttag cacctgctga
4081 gcaatcctat caagtcggca gatgtatagg ttttctatat ggagacttgg cgtatagaaa
4141 atctactcat gccgaggaca gttctctatt tcctctatct atacaaggtc gtattagagg
4201 tcgaggtttc ttaaaagggt tgctagacgg attaatgaga gcaagttgct gccaagtaat
4261 acaccggaga agtctggctc atttgaagag gcccgccaac gcagtgtacg gaggtttgat
4321 ttacttgatt gataaattga gtgtatcacc tccattcctt tctcttacta gatcaggacc
4381 tattagagac gaattagaaa cgattcccca caagatccca acctcctatc cgacaagcaa
4441 ccgtgatatg ggggtgattg tcagaaatta cttcaaatac caatgccgtc taattgaaaa
4501 gggaaaatac agatcacatt attcacaatt atggttattc tcagatgtct tatccataga
4561 cttcattgga ccattctcta tttccaccac cctcttgcaa atcctataca agccattttt
4621 atctgggaaa gataagaatg agttgagaga gctggcaaat ctttcttcat tgctaagatc
4681 aggagagggg tgggaagaca tacatgtgaa attcttcacc aaggacatat tattgtgtcc
4741 agaggaaatc agacatgctt gcaagttcgg gattcctaag gataataata aagacatgag
4801 ctatccccct tggggaaggg aatccagagg gacaattaca acaatccctg tttattatac
4861 gaccacccct tacccaaaga tgctagagat gcctccaaga atccaaaatc ccctgctgtc
4921 cggaatcagg ttgggccaat taccaactgg cgctcattat aaaattcgga gtatattaca
4981 tggaatggga atccattaca gggacttctt gagttgtgga gacggctccg gagggatgac
5041 tgctgcatta ctacgagaaa atgtgcatag cagaggaata ttcaatagtc tgttagaatt
5101 atcagggtca gtcatgcgag gcgcctctcc tgagcccccc agtgccctag aaactttagg
5161 aggagataaa tcgagatgtg taaatggtga aacatgttgg gaatatccat ctgacttatg
5221 tgacccaagg acttgggact atttcctccg actcaaagca ggcttggggc ttcaaattga
5281 tttaattgta atggatatgg aagttcggga ttcttctact agcctgaaaa ttgagacgaa
5341 tgttagaaat tatgtgcacc ggattttgga tgagcaagga gttttaatct acaagactta
5401 tggaacatat atttgtgaga gcgaaaagaa tgcagtaaca atccttggtc ccatgttcaa
5461 gacggtcgac ttagttcaaa cagaatttag tagttctcaa acgtctgaag tatatatggt
5521 atgtaaaggt ttgaagaaat taatcgatga acccaatccc gattggtctt ccatcaatga
5581 atcctggaaa aacctgtacg cattccagtc atcagaacag gaatttgcca gagcaaagaa
5641 ggttagtaca tactttacct tgacaggtat tccctcccaa ttcattcctg atccttttgt
5701 aaacattgag actatgctac aaatattcgg agtacccacg ggtgtgtctc atgcggctgc
5761 cttaaaatca tctgatagac ctgcagattt attgaccatt agcctttttt atatggcgat
5821 tatatcgtat tataacatca atcatatcag agtaggaccg atacctccga accccccatc
5881 agatggaatt gcacaaaatg tggggatcgc tataactggt ataagctttt ggctgagttt
5941 gatggagaaa gacattccac tatatcaaca gtgtttagca gttatccagc aatcattccc
6001 gattaggtgg gaggctgttt cagtaaaagg aggatacaag cagaagtgga gtactagagg
6061 tgatgggctc ccaaaagata cccgaatttc agactccttg gccccaatcg ggaactggat
6121 cagatctctg gaattggtcc gaaaccaagt tcgtctaaat ccattcaatg agatcttgtt
6181 caatcagcta tgtcgtacag tggataatca tttgaaatgg tcaaatttgc gaagaaacac
6241 aggaatgatt gaatggatca atagacgaat ttcaaaagaa gaccggtcta tactgatgtt
6301 gaagagtgac ctacacgagg aaaactcttg gagagattaa aaaatcatga ggagactcca
6361 aactttaagt atgaaaaaaa
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