GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS RATNKAA1A 2070 bp ds-DNA ROD 28-MAY-1991
DEFINITION Rat NKAA1 gene for Na+/K+ -ATPase alpha1 subunit 5' flank and exon
1
ACCESSION X53233 X51461
KEYWORDS (Na+,K+)-ATPase; Na+, K+ -ATPase alpha-subunit.
SOURCE Rattus norvegicus DNA.
ORGANISM Rattus norvegicus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 2070)
AUTHORS Kawakami,K.
JOURNAL Unpublished (1990)
STANDARD full automatic
REFERENCE 2 (bases 1 to 2070)
AUTHORS Yagawa,Y., Kawakami,K. and Nagano,K.
TITLE Cloning ans analysis of the 5'-flanking region of rat Na+/
K+-ATPase alpha 1 subunit gene
JOURNAL Biochim. Biophys. Acta 1049, 286-292 (1990)
STANDARD full automatic
COMMENT see x53234 for NKAA1 exon 2 seq
Data kindly reviewed (02-NOV-1990) by Kawakami K.
From EMBL entry RNNKAA1A; dated 16-NOV-1990.
FEATURES Location/Qualifiers
misc_feature 130..166
/note="(TC)-rich region"
misc_feature 788..793
/note="GRE core consensus seq"
misc_feature 919..933
/note="(T)-rich region"
misc_feature 1057..1062
/note="GRE core consensus seq"
misc_feature 1401..1406
/note="GC box"
misc_feature 1467..1473
/note="ATF-binding site"
misc_feature 1482..1487
/note="GC box"
promoter 1505..1511
/note="TATA-like box"
precursor_RNA 1538..>2070
/note="NKAA1 transcript"
mRNA 1538..1811
/note="exon 1"
CDS 1800..1811
/note="Na+/K+-ATPase alpha1 subunit"
/codon_start=1800
intron 1812..>2070
/note="intron I (0.7 kb not sequenced, see x53234)"
misc_feature 1838..1843
/note="GC box"
misc_feature 1890..1895
/note="GC box"
misc_feature 1936..1941
/note="GC box"
BASE COUNT 397 a 581 c 616 g 476 t
ORIGIN
1 gatcactgga agagataaag gctgtcttct gctataagca acagttgtat atgcaacagt
61 tgtttctaag aagtgcagag aattgctcta tggaagaact gataacacag tgattagttg
121 ttttgggtgt ttttcctccc tccctccccc cttttctttt ttttttaaag atttattcat
181 tcatttattc atttatttta tgtatgttgc tctcttcacc accaccacac cagaagaggg
241 caggcatcag atctcattac agatggctgt gaggccacca tgtggtttct gggatttgaa
301 ctcaggacct ctggaagagc agacaatgct cttaaccact gagctatctc tccagccccc
361 ctcccccctt ttctttgcaa gccccacatc ctacaaaaag cattggcgct tgaagttgat
421 aggtctagat ctaagaagtt aatgttttcc ttgcttctcc caggagtttc cagagatgga
481 aatcgagttt ctccaccgaa tcctgcgctt tcccagagtg cttgctttcc tgacattgat
541 gatgacgatg atgatgatga tactttgtta tttttaatga taagtttcag ccatcatagc
601 acctgctaag ccactgaaac ggaagccctg ctctcaactt tgccaggcca agagcgggcg
661 actggctggg cgtgagactg attagtccct cagggtaacc acggatgctg tgcatgatgt
721 ggggcgctgc tgttgggagg tgcggagctg cagagcgttt tgagccacct cttttactaa
781 agataggtgt tcttttgggt ttcagatttc tctaccataa aaaggggaat ctctctgaaa
841 agcaggttaa cacccctccc ccctcctctt gcaagtagat ttcattcata cagtgctgtg
901 aatgaacttc ttactggctt tttttttttt tttaatagtc acttggggtc ataaggaaag
961 ggaagtgtaa gtgacgcgcg cacgcgcgag tgtgtgtgtg tgtatatgtc tgaagcattt
1021 ctctagtggt ggaatgagaa gttgtaagag gatcccagaa cagaggaatc aaagggaagg
1081 taccatctgc agataggtgc gggcctggat ctgcagagaa gagtccctcg gagtcgcgca
1141 gctgctgtcc aaccccggcc cctcgagacc cccgacgctc tagaaaacgt acgctgagca
1201 agtgggctag ccccgactgc gccgcgccgc acccactgcg gaccttccgc gctctacttc
1261 gcaggctgct cagtcaaata cccggtcctg gaggcagacg cgctccgtag ccctctagag
1321 accggggcac tcgggtactg ggcccgggcg ccctcctgcc gggagcccgg gctaggcagc
1381 ggctagcgtg gtccgggccc ggcggggagg ggttagaggc ggaggcggag gccagctgga
1441 gccggtgtca ggttgctccg gtaacggtga cgtgcacgcg tgggcggagc catcacgcag
1501 gttgcatatt ttaggaagtg aggaggaggc aagggctgga gctgcggctg ggtctggggc
1561 gcggagcctc ggcgggagga ggcggacacg tggcagcggc ggcggcagcg gcagcagcag
1621 cggcggcagc agcggcggcc tcggtccggg gcgccggccg tcctccctct ttcctccggc
1681 ggcagcccta gttcccgcct ctcggctccc ccggctccac tctcccagcc gggagctgct
1741 ctctcctctt tctagtctcc agccacagga cccggcgcgg ggcccgcagc gccgccacca
1801 tggggaaggg ggtgagtgtc tggcgagccc gggccgcggg cgggggcgcg ggaggaagcg
1861 gcttggagac ccggctctcc gcaatggagg ggcgggtgct gagagccggc agcggccctg
1921 gaggagtagc acccggggcg gcatccctga gcccggcgcc tgccctgcct gagccctttg
1981 gtcgccttca ccgcgcgcct tgcgcttcct ttctccctcc tcccaccgtg cccagggaaa
2041 ggagcgctcc tccccttccc ccggggagct
//