GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS RATU5ARN 116 bp ss-mRNA ROD 28-MAY-1991
DEFINITION Rat U5A small nuclear RNA
ACCESSION X04214
KEYWORDS U5 small nuclear RNA; small nuclear RNA.
SOURCE Rattus norvegicus RNA.
ORGANISM Rattus norvegicus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 116)
AUTHORS Krol,A., Gallinaro,H., Lazar,E., Jacob,M. and Branlant,C.
TITLE The nuclear 5S RNAs from chicken, rat and man. U5 RNAs are encoded
by multiple genes
JOURNAL Nucleic Acids Res. 9, 769-787 (1981)
STANDARD full automatic
COMMENT *source: tissue=brain; The rat U5A small nuclear RNA is identical
to the chicken U5A and U5A' small nuclear RNA (see x04213)
From EMBL entry RNU5ARN; dated 09-MAR-1987.
FEATURES Location/Qualifiers
snRNA 1..116
/note="U5A small nuclear RNA"
misc_feature 1..1
/note="2'-O-methylated A"
modified_base 2..2
/mod_base=um
/note="2'-O-methyluridine"
modified_base 37..37
/mod_base=gm
/note="2'-O-methylguanosine"
modified_base 41..41
/mod_base=um
/note="2'-O-methyluridine"
modified_base 45..45
/mod_base=other
/note="X(m) put.1-methylpsuedouridine"
modified_base 53..53
/mod_base=p
/note="pseudouridine"
BASE COUNT 29 a 26 c 21 g 40 t
ORIGIN
1 atactctggt ttctcttcag atcgtataaa tctttcgcct ttcatcaaag atttccgtgg
61 agaggaacaa ctctgagtct taaaccaatt ttttgagcct tgttccggca aggcta
//