GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS RATPSP16 1602 bp ss-mRNA ROD 28-MAY-1991
DEFINITION Rat 1.6 kb mRNA for pulmonary surfactant protein A (SP-A)
ACCESSION X13177
KEYWORDS differential polyadenylation; glycoprotein;
pulmonary surfactant protein; pulmonary surfactant protein A.
SOURCE Rattus sp. RNA.
ORGANISM Rattus sp.
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 1602)
AUTHORS Fisher,J.H., Emrie,P.A., Shannon,J., Sano,K., Hattler,B. and
Mason,R.J.
TITLE Rat pulmonary surfactant protein A is expressed as two differently
sized mRNA species which arise from differential polyadenylation of
one transcript
JOURNAL Biochim. Biophys. Acta 950, 338-345 (1988)
STANDARD full automatic
COMMENT SWISS-PROT; P08427; PSPA$RAT.
*source: developmental stage=adult; tissue=lung; *source: library=
lambda gt10; For 0.9 kb transcript formed by alternative
polyadenylation see <X13176>. Base 901 (A) is G in <X13176>.
Data kindly reviewed (08-MAR-1990) by Fisher J.H.
From EMBL entry RSPSP16; dated 12-JUN-1990.
FEATURES Location/Qualifiers
misc_feature 29..31
/note="pot. alternative translational start"
CDS 56..799
/note="pulmonary surfactant protein A (AA 1-248)"
/codon_start=56
BASE COUNT 407 a 401 c 395 g 399 t
ORIGIN
1 cagatatcca cacagcctgc aggtctgtat gtggaagcca ctggggatag tagccatgtc
61 actgtgttct ttggccttca ccctcttctt gactgttgtc gctggtatca agtgcaatgt
121 gacagacgtt tgtgctggaa gccctgggat ccctggagct cctggaaacc atggtctgcc
181 tggcagagac gggagagacg gtgtcaaagg agaccctgga cctccaggtc ccatgggccc
241 tcctggagga atgccaggtc ttcctggacg cgatgggctg cccggaggac ctggtgcacc
301 tggaggacgt ggagacaagg gagagcctgg agaaaggggc ctgccaggat ttccagctta
361 cctggatgag gagctccaga ctgaactcta tgagatcaaa catcagattc tgcaaacaat
421 gggagtcctc agcttgcaag gatccatgct gtcagtgggg gataaagtct tttccaccaa
481 tgggcagtca gtcaactttg ataccattaa agagatgtgt accagagcag gaggcaacat
541 tgctgtcccg aggactcctg aggagaacga ggccattgca agtattgcga agaactacaa
601 caactatgtc tacttgggca tgattgaaga ccagactcct ggagacttcc actacctgga
661 tggggcttct gtgaactaca ccaactggta cccaggagaa cccaggggtc agggcaaaga
721 aaagtgtgta gaaatgtata cagatgggac atggaatgat aggggctgcc tgcagtaccg
781 gctggctgtt tgtgaatttt gatcaagcaa ttagacgaaa agatgaaccc tcacactgcc
841 tctatcctga tgattcatct ggtctgtaaa accctgcaac tacctttact tgtggccttc
901 agtaattaga agcatctttt gtcacccccg ctcccacata gttcccaaac acttctccat
961 attcattagc aatcctgagt gtttccctag agtcccatct gagcgttcat tcaaggtagc
1021 cattgtaaac cttggccttg accatgagat ggatagatac ttcctttttc ctcactttat
1081 ccagtcttca tttataaatg gtggccatga agacccagca tggaaggacc ctctaactaa
1141 gtgctgccct ctgacctttc cacccttctg tagctcggtg tcccaggatt tagaagtcca
1201 ggttaaacat aggggatttc tgggaaagcc tagtatgtgg gtgcaggcca cattcatgcc
1261 atctgtatcc atggctttca aggcaaacat tgtctctaag aagccagaga accaggagaa
1321 ccaggtagga ccaggtagta ctgggggaac ataaactcac ttggtttggc atgtatggct
1381 cctccttggg tctggaggtg ccatcttgac cttgaactaa cagcagccac cctgggtttt
1441 gagagaacga ccttcccagc ccagacccca actcaagtaa tttcctgcta acagacacag
1501 cctcagttca ctttacatca ctgaggcatt catgatacga actgcaatct gttttctcct
1561 ctcgtgagtt caatcagcta ttcattaaag tcaactgcat tc
//