GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS TBETBEV1 2100 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Tick-borne encephalitis virus (TBEV, strain Sofjin) genes for
proteins C,M and E
ACCESSION X03870
KEYWORDS glycoprotein; lipoprotein; protein C; protein E; protein M.
SOURCE Tick-borne encephalitis virus RNA.
ORGANISM Tick-borne encephalitis virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Flaviviridae; Flavivirus (arbovirus group B).
REFERENCE 1 (bases 1 to 2100)
AUTHORS Pletnev,A.G., Yamshchikov,V.F. and Blinov,V.M.
TITLE Tick-borne encephalitis virus genome - The nucleotide sequence
coding for virion structural proteins
JOURNAL FEBS Lett. 200, 317-321 (1986)
STANDARD full automatic
COMMENT SWISS-PROT; P07720; POLG$TBEVS.
From EMBL entry TOTBEV1; dated 18-NOV-1986.
FEATURES Location/Qualifiers
CDS 51..2100
/note="C,M,E-cluster precursor"
/codon_start=51
CDS 54..338
/note="protein C"
/codon_start=54
CDS 339..890
/note="preprotein M"
/codon_start=339
CDS 666..890
/note="protein M"
/codon_start=666
CDS 891..>2100
/note="protein E"
/codon_start=891
BASE COUNT 563 a 462 c 642 g 433 t
ORIGIN
1 gagtcgtgaa cgtgttgaga aaagacagct taggagaaca agagctgggg atggccggga
61 aggccattct gaaaggaaag gggggcggtc cccctcgacg agtgtcgaaa gagaccgcga
121 agaagacgcg tcaatctagg gtccaaatgc caaatggact cgtgttgatg cgcatgatgg
181 ggattctatg gcacgccgta gccggcactg ctagaagtcc cgtgttgaag tctttctgga
241 aatcagttcc actgaaacag gccacggcag cacttcggaa aattaagaag gcagtgagca
301 ccctgatggt aggtctgcaa agacgtggca aaagaaggtc ggcagtagac tggacaggtt
361 ggttgctggt tgttgtcctg ttgggagtga cacttgcagc cacagtgcgg aaggaaagag
421 atggcaccac cgtgatcaga gctgaaggaa aagatgcggc aacccaggtg cgtgtggaaa
481 atggcacctg tgtgatcctg gccacggaca tgggatcatg gtgtgatgat tcactaacct
541 atgagtgtgt gaccatagac cagggggagg aaccggttga cgtggattgc tcttgcagga
601 atgttgatgg agtttacctg gagtatgggc ggtgtggaaa acaagaagga tcaagaacaa
661 ggcgttcagt gctgatccca tcccacgctc agggagatct cacaggaagg ggacacaaat
721 ggttagaagg ggattcatta cggacgcacc tcactagagt tgagggatgg gtctggaaga
781 ataaagtgct caccctggcg gtgatcgccg ttgtgtggct gaccgtggaa agtgtggtga
841 ctcgggtcgc cgtagtggtg gtgctcttgt gcctggctcc ggtttatgcc tcacggtgca
901 cacatttgga aaacagggat tttgttactg gcactcaggg gaccactcgt gtgactctgg
961 tgttggaact gggaggatgc gtcaccataa cagctgaggg gaagccctcg atggatgtgt
1021 ggcttgactc catctaccag gagaaccctg ccaagacacg tgagtactgc cttcacgcaa
1081 aactatcgga taccaaagtc gcggccaggt gcccaacaat gggacctgcc actttggctg
1141 aagagcacca gagcggcaca gtgtgtaaga gagaccagag tgatcgaggc tcgggcaacc
1201 attgtggatt atttggaaaa ggcagcattg tgacctgtgt caaggcgtct tgtgaggcaa
1261 aaaagaaagc cacaggacac gtgtatgacg ctaacaaaat tgtgtacaca gtcaaagtag
1321 agccgcacac gggggattac gtcgctgcta atgagactca cagtggaaga aaaaccgcgt
1381 ccttcacggt ttcctcggag aggaccatct tgaccatggg agactacgga gacgtgtcct
1441 tgttatgcag agtagccagc ggtgttgacc ttgctcagac cgtcatcctg gagcttgaca
1501 agacctcaga acacctaccg acggcctggc aggtccaccg ggactggttc aatgatctgg
1561 ccctaccgtg gaaacatgaa ggggcacaga attggaacaa cgcggaacgg ctggttgagt
1621 ttggagctcc acatgctgtg aaaatggacg tgtacaacct tggagaccag actggagtgt
1681 tgctcaaatc acttgctggt gttcctgtgg cgcacattga tggaaccaag taccacctga
1741 aaagtggcca cgtgacatgc gaggtaggac tagaaaaact taagatgaaa ggtcttacat
1801 acacaatgtg tgacaagacg aaattcacgt ggaaaagaat tccaacagac agtggacatg
1861 acacagtggt catggaagtt gcgttctctg ggaccaaacc ctgcaggatc ccggtgaggg
1921 ccgtggcaca cggctccccg gatgtgaacg tggccatgtt gatgacaccc aaccccacaa
1981 tcgaaaacaa tggcggtggc ttcatagaaa tgcagttacc tccaggagat aatatcatct
2041 atgttgggga actgagtcac caatggttcc aaaaagggag tagcattgga agggtttttc
//GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS TBETBEV2 780 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Tick-borne encephalitis virus (TBEV, strain Sofjin) NS1 gene
ACCESSION X03871
KEYWORDS nonstructural protein.
SOURCE Tick-borne encephalitis virus RNA.
ORGANISM Tick-borne encephalitis virus
Viridae; ss-RNA enveloped viruses; Positive strand RNA virus;
Flaviviridae; Flavivirus (arbovirus group B).
REFERENCE 1 (bases 1 to 780)
AUTHORS Pletnev,A.G., Yamshchikov,V.F. and Blinov,V.M.
TITLE Tick-borne encephalitis virus genome - The nucleotide sequence
coding for virion structural proteins
JOURNAL FEBS Lett. 200, 317-321 (1986)
STANDARD full automatic
COMMENT SWISS-PROT; P07720; POLG$TBEVS.
From EMBL entry TOTBEV2; dated 18-NOV-1986.
FEATURES Location/Qualifiers
CDS 103..780
/note="NS1 (aa 1-678)"
/codon_start=103
BASE COUNT 205 a 159 c 248 g 168 t
ORIGIN
1 tggtcaggca aggttgggcc tgaacatgag gaatccgacc atgccatgag cttccttctg
61 gctggaggac tggttctggc catgacactc ggagtgggag ctgatgttgg ctgtgctgtg
121 gacactgaac ggatggagct ccgctgtggt gagggtctgg ttgtgtggag agaggtatcc
181 gaatggtatg acaattatgc atactacccg gagacactag gagctcttgc ttcggccata
241 aaggagacct tcgaggaggg aacttgtggc atagtgcccc aaaacagact tgagatggcc
301 atgtggagga gttcggcgac agaactgaac ttggctttgg tggagggaga cgcaaatctc
361 acagtggtgg tggacaaact cgatcccaca gattatcgag gtggcattcc tagcttgcta
421 aaaaagggga aagacataaa ggtttcttgg aagagttggg gccactcaat gatctggagc
481 gtccccgagg ccccccgtct gttcatggtg ggaacagagg gaagcagtga gtgcccacta
541 gagagaagga aaacaggtgt cttcacagtg gcagagtttg gagttggctt gagaacaaaa
601 gtatttttgg acttcagaca ggaatcaaca cacgagtgtg acacaggagt gatgggagct
661 gctgtcaaga atggcatggc agtccacaca gaccagagcc tctggatgaa atccgtgaga
721 aatgacacag ggacctacat agtggaactt ctggtcactg acctgagaaa ctgctcatgg
//