GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS TNSSTNV 1239 bp ss-mRNA VRL 28-MAY-1991
DEFINITION Satellite tobacco necrosis virus genome including reading frame for
the viral coat protein.
ACCESSION V01468
KEYWORDS coat protein; genome; origin of replication.
SOURCE Satellite tobacco necrosis virus RNA.
ORGANISM Satellite tobacco necrosis virus
Viridae; ss-RNA nonenveloped viruses; Isometric ss-RNA viruses;
Tobacco necrosis viruses.
REFERENCE 1 (bases 1 to 23)
AUTHORS Leung,D.W., Browning,K.S., Heckmann,J.E., RajBhandary,U.L. and
Clark,J.M.
TITLE Nucleotide sequence of the 5' terminus of satellite tobacco
necrosis virus ribonucleic acid
JOURNAL Biochemistry 18, 1363-1366 (1979)
STANDARD full automatic
REFERENCE 2 (bases 1 to 1239)
AUTHORS Ysebaert,M., van Emmelo,J. and Fiers,W.
TITLE Total nucleotide sequence of a nearly full-size DNA copy of
satellite tobacco necrosis virus RNA
JOURNAL J. Mol. Biol. 143, 273-287 (1980)
STANDARD full automatic
COMMENT SWISS-PROT; P03606; COAT$STNV.
From EMBL entry XXSTNV; dated 06-JUL-1989.
FEATURES Location/Qualifiers
CDS 30..617
/note="reading frame (coat protein)"
/codon_start=30
allele 585..585
/note="G can be A"
BASE COUNT 346 a 282 c 305 g 306 t
ORIGIN
1 agtaaagaca ggaaacttta ctgactaaca tggcaaaaca acagaacaac aggcgaaaat
61 ccgcaacaat gcgtgcagtg aagcgcatga taaatacaca cttggagcat aaaaggtttg
121 cactgatcaa ctcagggaac accaatgcaa ctgctggtac agtacaaaat ctgtccaacg
181 gtataatcca aggagatgat atcaaccaga gaagtggtga tcaagtgcgt atagtttcac
241 ataaacttca cgtacgaggc actgccatca ccgtcagcca gacctttaga tttatctggt
301 ttcgtgataa catgaaccgt gggaccactc ccacagttct tgaggtgttg aacactgcga
361 atttcatgtc gcagtataac ccaatcacgt tgcagcaaaa gagatttaca atactcaagg
421 atgtaactct caattgttcg ctgacagggg agagcattaa agatcggata attaaccttc
481 caggacaact ggtgaactat aatggagcga cggctgtagc agcctccaat ggtcccggcg
541 caatatttat gttgcagatt ggcgactcct tggttggtct gtgggactcc tcttatgagg
601 ctgtgtacac agatgcataa tcccagaggt tcacaatgtt agtgatgggg cgctgaaaga
661 tgcgtagcta cccttctgga gccacttcct ggtggtaagc agaaatccaa gggtacggtg
721 gtacggtgga aagcagtccc agctctgcat tgggaaccgg cttacaccca gcttagggct
781 aaagtgtact acttgctcat ttgtagtcta aatgagacgt tggcctcgac gtgtcgaggt
841 ggcctaaggg attggaaccc ctgatggtcg tagtcgaatt tcccgtgttt cattccgagt
901 ctcttggtca taatgccatt agtaggtcta gcactcaacg taacttcaaa gatatcctcc
961 ttgcaacaag aatatgtgcg ccgtctgtgt ttaaagcggt atattaagtg cgccggcata
1021 tcgttgtttg gaccagggcc ccacgccggt tggtacccgg gtggcttccc ctcgttcaca
1081 gggctttagg agatgataag gtatagttat tagacaaatg cggacaaacc tgaaaagctc
1141 gctagtggtg ggctggccaa gcgaagaacc tcatccaggt atagttctac atgggaaatt
1201 tggtaccatc caaacttcta tgaagtcctc gactacccc
//