GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS ZEFEPD 857 bp ss-mRNA VRT 28-MAY-1991 DEFINITION Zebrafish mRNA for ependymin ACCESSION X52502 KEYWORDS EPD gene; glycoprotein; prepro-ependymin. SOURCE Brachydanio rerio RNA. ORGANISM Brachydanio rerio Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes; Actinopterygii; Cypriniformes; Cyprinoidei; Cyprinidae. REFERENCE 1 (bases 1 to 857) AUTHORS Hoffmann,W. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 857) AUTHORS Sterrer,S., Koenigstorfer,A. and Hoffmann,W. TITLE Biosynthesis and expression of ependymin homologous sequences in zebrafish brain JOURNAL Neurosci. 37, 277-284 (1990) STANDARD full automatic COMMENT SWISS-PROT; P17561; EPD$BRARE. *source: tissue=brain; clone=pZF-3'-L.1, pZF-3'-S.6, pZF-5'-2.16; For goldfish ependymin I and II see <X14134> and <J04986>. From EMBL entry BREPD; dated 05-JUL-1990. FEATURES Location/Qualifiers CDS 6..656 /note="prepro-polypeptide (AA -20 to 197)" /codon_start=6 CDS 6..65 /note="signal peptide (-20 to -1)" /codon_start=6 CDS 66..656 /note="pro-ependymin (AA 1 to 197)" /codon_start=66 misc_feature 710..715 /note="polyA signal" polyA_site 735..735 /note="polyA site" misc_feature 837..842 /note="alt. polyA signal" polyA_site 857..857 /note="alt. polyA site" BASE COUNT 220 a 205 c 183 g 249 t ORIGIN 1 caacgatgca tacagtcaag ctgctctgtg tggtgttctc ttgcctctgc gccatcggct 61 gggcttctca tcactctcat cggcagccat gtcattcacc acagctgacc agtggaacga 121 tgaaagtggt ttccacaggg ggtcatgacc ttgcatctgg agagttcagt tatgactcca 181 aaacgaataa atttcgtttt gttgaggaca ccactcacgc gaacaaaact tcttatatag 241 atgtgctcat acattttgaa gagggtgtac tctatgagat agacagtaaa aatgagagtt 301 gcaagaagga gactctgcag ttccgcaagc acctgatgga gattcccgtt gatgccactc 361 acgagtctga gagttacatg ggtagcccct ctctcaccga gcagggactc agagttcgtg 421 tgtggaacgg aaagtttcct gaacttcacg ctcactactc tctgtctacc acctcctgtg 481 gctgtttgac ggtctctggc tcctactatg gcgagaagaa agatcttttc ttcagcttct 541 tcggtgttga aacagaagtt gacgaccttc aagtatttgc acctccggcc tattgtgagg 601 gtgtgtcatt tgaggaggct ccagacgatc acagcttctt cgacctgttc cacgactgaa 661 gaaaacacac aagatgacct gcaaactgcc aacaatggct acatacaata ataaaaagag 721 catttaatta caaatatttc ctgtatccat ctctctttct tcagaaaatg cttgcacttt 781 ctatcttacc ttcttttttt gtcttttgca atttgtttct gcactctaat gaagtcaata 841 aagatgagct ttcgctg //