GenBank-Updates@genbank.bio.net (05/29/91)
LOCUS FSBIGHD 8471 bp ds-DNA VRT 28-MAY-1991 DEFINITION Catfish Igh DNA for immunoglobulin heavy chain (mu) ACCESSION X52617 KEYWORDS immunoglobulin; immunoglobulin heavy chain. SOURCE Ictalurus punctatus DNA. ORGANISM Ictalurus punctatus Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Osteichthyes; Actinopterygii; Siluriformes; Ictaluridae. REFERENCE 1 (bases 1 to 8471) AUTHORS Warr,G.W. JOURNAL Unpublished (1990) STANDARD full automatic REFERENCE 2 (bases 1 to 8471) AUTHORS Wilson,M.R., Marcuz,A., van,G.F., Miller,N.W., Clem,L.W., MIddleton,D. and Warr,G.W. TITLE The immunoglobulin M heavy chain constant region gene of the channel catfish, Ictalurus punctatus: an unusual mRNA splice pattern produces the membrane form of the molecule JOURNAL Nucleic Acids Res. 18, 5227-5233 (1990) STANDARD full automatic COMMENT *source: tissue=blood; cell type=erythrocyte; library=EMBL3; *source: clone=12c; For overlapping sequence see <M23733>. From EMBL entry IPIGHD; dated 14-NOV-1990. FEATURES Location/Qualifiers mRNA 99..404 /note="CH1 domain exon" mRNA 2172..2477 /note="CH2 domain exon" mRNA 2925..3227 /note="CH3 domain exon" mRNA 3462..3850 /note="CH4 domain exon" misc_feature 4019..4024 /note="polyA signal" mRNA 5743..5876 /note="membrane domain exon 1" mRNA 8163..8168 /note="membrane domain exon 2" misc_feature 8336..8341 /note="polyA signal" BASE COUNT 2768 a 1494 c 1362 g 2847 t ORIGIN 1 taaatgttgg tttgtgctct ggctatctct ctctctctct ctctctctct ctctctctct 61 ctctctctct ctatctatct aactatctat atctacagct gtgcaaagcg ccccgaaatc 121 cctgtttccc gtgtggcagt gcggctcggc ctcggacggt ttagtcactc ttggctgcgt 181 cacgcgcgat ttggcctccg ccgacggact gagcttcata tggaaggatg cgagcgggag 241 cgcgctgact gacgtcgtgc aatacccggc ggtgcaagcg accggagggt acacctcggt 301 gagccatgtg cgcgtcaagg cttctgactg gaacgggaac aagaagttca cgtgcgaagt 361 caaaaatggc ctaggatcta aagacgcgtc cttgcaaaag ccaggtaggc gagaaacaac 421 tgaaaacacc cttttgtgtg tcatttccaa atatgcaatc agtgtccaca ttattaggta 481 acctacacct gccccataca aacactttac taaactttcc ttgatactgg ggtgatacag 541 tcatgggtag ttttttgtac cttttaatct gtatgtttta cctggaaaca tgaaaccagt 601 gcacctttta aaaataattt aaggcacaca attggacgtg aaggcccagt gatgtacatt 661 tacagcttta ttctaaaagc taatttaagg tacttcacgt gcacctcccc tggtaaaata 721 tacatattaa aagatatcaa agacttgatt tgatgattgt acctagattt actgacaccg 781 tgttgatgaa atggtcaatg cacacacaca cacacacaca cacacacaca cacacacaca 841 cacacacaca tcatatatta tacctagcaa gcaaacaaaa agtaatatat atgctaaaac 901 aaataaacat attgtttatt tatgtttact ctgcttaaac atttatgatc atttacagat 961 atagtacaga agtgtttatt ctttataaca ccgttttagc tgtaactcat aaaattcctg 1021 taaaactaca ttatttaaat agaaaagttg aaatcagcag caaccattga attgttaaaa 1081 aaaaaaaaaa aggttatttt ctatactggc accaatcaga gtttctggtt atgcaatcag 1141 agagattaaa aattcagata caacactttg ttccccacta gcctcaaaga tgatatagat 1201 ggttacaaat ttataataat tagtgttaat atttctctta gctacataca caatctaatt 1261 acagtctgag tgtgagcatt attctttaag aaaatgatgc aaaggatgtg aaatttgact 1321 gtaaacagaa taattgtcta caaaagtttc aattccttca agtccttttt aaagaagatg 1381 ttgcatgtgt aatcacactg agacagtctg ctttggccat ttaaagtgtc tgactaaaag 1441 tttattattc ctaaaatgtg tatccatttt tttctgactt tcagtcagca ctggaacatt 1501 ttatgtccag agtcaaacat tttaaattcc aaagcttacg tatactgtgt ggtctttctc 1561 tgccaatgct aaacaaagcc tgttcccttt ttcacctgtg ccttatgact tcttgcatgt 1621 ttgttgccac agtatgtcat caaaacatat gcaaaagttt gctgtggcat caacagttct 1681 aggtgataaa ttagatttta cagactagta aactataatt taagggtttc tcagcctcag 1741 ttccagagaa ttaaacagtg caaaatcctc tgtctttcca tggttctgaa actggagact 1801 tcttccataa atgttaaata aatgtctcct tatagaaagc tttacaatgt caatgattgt 1861 aaacattttt tgataaataa cacatttttt taaagtgttt attattaggc ttatagaatg 1921 tcaactacac cagtacctgc ataattgtta ctatagaaac aataacatat cgagtgcatt 1981 aatacaaaat atagataatt tattaacatt aattgagaat ttgacagcat tctgatataa 2041 atttagatat tatgtggtat aaaaatagca tttttgtgac cttatatact gtggcaacac 2101 aacctatttc taaactgcaa tacctgctgt gcccattgct gctgatatgg atctgtgtgt 2161 ttgttttgca gttgagagag agctccatgc atctctgctt ctaacaactc caacccaaac 2221 agaaatagac aatggaacag ctaccttcgt ctgcttagct acaccatttt cacctaaatc 2281 acacacattt aagtggactc ttgaaaagac agacatcagt aataaggtca aagagaacat 2341 agtaagccag aataaaggta acttcactgc cataagtgtt ttggaactca gcgccagtga 2401 atggacaagc tcaacttctc cagttaagtg cgaattccag cagaagaacc ataatgtgtt 2461 caaagaagcg agttatggta tgtattatat tattctattt cattaaaaaa atttttttag 2521 caactttcaa tttgacagac cgtctgaaca gctatattac taacttcttc aaaagaagca 2581 gtctatctca attgatttaa aacttcctct atctgggttt tagcttgata gtatacttac 2641 acgataatat gaggatctgt ttttgatgaa aaactacaac acacttgcta aatgctgtaa 2701 atgtaaattt gctttaaagt aatgatttgc attctagttt gaataaaaat gtcaattatg 2761 tatcagttat atgtttattt ataatggtaa tgtgcactaa aactctagat tttatggcac 2821 attttcagat tatacattcc ctgtgttttt ttgtttttgt ttatttgttt tttcaaatac 2881 tcctttgctt ctttaaaaaa tgtatttcta caacttcttt acagcaccag gtgacacaaa 2941 acagccacag gtgaaaataa ctggaccttc caccgaggac attctgatca aaagagccgg 3001 ccagctcgag tgcagggccg agggagacac gggtttcaag agcattaaat ggcttattgg 3061 aaatagagag atctcttctc tatcaaatct atcttcgaaa acgacggttt cactccaaac 3121 ccacatcggt ttcgaagagt ggatcaatgg caccgaattc atctgtgagg tggaacatga 3181 agcattcact caacagtatg aaaaagtaac cttcaaaaga gaaaatggta ggaaatgctt 3241 ttactactta tacatattct tgctcttaat ttgtatgaaa aagctatgag gatttttaag 3301 aagcagaaaa tcacattttt aaagctatct aattatattg aaattatatg ctaattattt 3361 ttgtttcgtt tacatatgac cagtgttccc caacatacgg aaacaatgca agagaaggaa 3421 acagaacata ttttgactta attgtgattt catgtttata ggcaatccgg aattccccaa 3481 ggtttacttg ctcgctccac cagagagctc tggtgaatca gtgaccctga cttgctatgt 3541 taaagacttc taccctaagg aggtggctgt gtcttggctt gttaacgata aacaagtgga 3601 agaagtggtc ggctatgagc agaacaccac tgcagttatc gacagaaaca acctcttttc 3661 agtgtacagc cagctgatta tcaaaactgc agactggaac agtggcagtg tgttcagctg 3721 cctggtttat catgagtcca tcaaggactg tgtgcgccac atatccagat ccatcgctaa 3781 agattcaaaa acgcccacct tagtgaatct caccctgacc aatccccaat cttgctcttg 3841 ctctacgtat tagaatttgt gttgtctgct attaatgctt gatttatttt aatttttgcc 3901 tcatctttta tgtctttttt tttattaatg caatgtcatt gtcttgatgt ctgtctgatg 3961 cttgtatgtc cttggttttt ggaacatgtc taatgcaata atacactgaa acaatgacaa 4021 taaaaaaatc cttcagcatg taccctgtgc agtacggtaa tattatatta cactgacttt 4081 agacatcatt attggaccat atcctaaata tgggttgcat aaattaatgc catgcctgga 4141 ctggctttaa gttaagacat tttacttaca gctgttttaa tgccctcctt catcatattc 4201 tcaacacatc agcctttaag caaatcattt atatgcgctt taaagagctt tcaaatatct 4261 cttcaaatag tttaataaaa tttaaagaga aatccattaa taaactattc attctgttaa 4321 atataataga gaatgctcca aagctttccc ccacaatgtc aactgtgtgt gtgtgtgtgt 4381 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtttgcat tgttgtaata 4441 tttttgtcaa gctttttttg ttctgtgttc agtgacgtag taaatatatc ctcaattact 4501 gttttatctg caacaagcca agacatccgg cctctctctt tcatgtggag aactttttcc 4561 accattttcc ttgaagggtt gggggtcact ggtttcatgt gtaacttagc aaagctacat 4621 gcatagcttt catattaaaa atgcactgaa atattgacat aatataatga tacgcattct 4681 gaattttaga taaatacaag caacctgtca tggcattttt tgtttttaga accttttgct 4741 gattttgaag ttacaccact ttgataaggc accacttaaa cactaatttt cttcccaatc 4801 gtgagataaa ttattaagac tataaatcca tggattaaag aaaagaatca cacctaagaa 4861 acctattcaa gaaataaaac gcagatattt gccattatat tagccataat ggttttggtt 4921 gcaatattaa aaaaaaaaaa aaaatgcatt gatgcataag aaataaaaca ctttagaaag 4981 tgcttttata cagcagatat acataatagc tatagataag atagataaag aataatagat 5041 tagataatag aataatcaat gatgtgatgg tgtgatgcaa actgatgtga agcacagtta 5101 caaaagtgtg acttttcaca ttagtgagaa agtgcaaagc tgaacattct aaagatattc 5161 ttatgtcaga aaccttaaaa ttacagctta cacactaaag acatcttcca taaatattaa 5221 ataaatgtct ctgtacagaa aacaggactg tatcagcatg tacagtacaa acatttttta 5281 atctgtttag gtgcatttta cagaaatata gaaataataa cattaaaaca agcaccttgt 5341 agtcagaact actgtcagag ctgatattat ttaaaaaatc aacaacttct taccaagcgg 5401 agtagagaat tcaacagcac tgtggtgtga aattaaataa gagtgacaaa atactaaatt 5461 aaaagtgcca attttggcta ttttaaatgt acacattttt atttaatgag agccaaacct 5521 tatgtaatgc tgtgaaacaa gtcgcatgag actggcaagg gaagattaca tgcttcatat 5581 ttagtacata gagtccactt ttaattcttc atactgtgta tagtgtgtaa gttgctgtgt 5641 acattgttta tatttagtgt gtaaactgct acatgtgtac tttctgttcc taatctcatc 5701 atatataaat gcccttaaat gaatgtgtgt gtatgccaac agtttgcata tggtcgacag 5761 agatcttcca ctatgagatg gagatggatg atgataacat ggcaaacact gccttaacat 5821 ttgtatttct cttcctcatc accctcttct acagcattgg agtgactgtt ttcaaggtaa 5881 gacctgatcc aataaatata agcagggtga attcaggtat actgagacaa acaaacaaaa 5941 aaagtattat gcagattttt ttacttggtt atatactctc acagactaat cttgagattt 6001 tttatttttt tttaataatg tcacattgtt actgtaagaa ataaatcata aaatcgaatt 6061 aatttgtcaa atccaattgg tcaaaagggg ttgattcatt ttctataaca gtagctatga 6121 caataattct agctgtactt caattagaga ggtttttggt tttatatata tatatatata 6181 tatatatata tctcacaaaa gtgagtacac ccctaacaca acagaatgcc atatcatgtt 6241 ttagtagtta ataattaacc ttttgtcatg cttttctcct gtgactttaa cttcttatga 6301 atagaaaaga tataaaattg tccgttatat aattgtcaag tcctgaagat tttctcaacc 6361 ctgttagagt aatacaaaaa aacagtatat agttgaaatt agctaacttt tttacttact 6421 gagttgtctt tacatacaaa catgtgaaaa aaaatgtaca tccaattgaa atcattggct 6481 cattttcttt gatttttttg ttttttacat atttgaacaa gcaaacattt gatcatcttt 6541 gaaacagtgc ctattaataa agttgatata cttgaacaaa accacaagga aacatagctt 6601 tttcaatcat ttatttaaca gaaatctgaa taaactataa aaatctgaat ttgaatattc 6661 tgaacagatt tcttgcaagt actgtccatt taaaatctct ccatttcaat ggcattcaaa 6721 tccaggcttt gactaggtca ttccattacc cttcatttcc tctttttgag tcattccttg 6781 gtggatttcc tagtgtgatt aggatcatta tcctgttgaa aggtccactt ttggttcaac 6841 ttcaactttc ggacagatgg ccacacatta tcttcaagca ccttttgata tgatacagaa 6901 ttcatagttg aatcaataaa tgcaagctgt ccagtccctg aggcagcaaa gcaaccccac 6961 cccataacat ttccactaca cagttggtat gaggtgcttg tcctgaaaag ctctctttgg 7021 tcagcaccaa atatgtctgc tgttactatt gccaaacaac tctatatttg attcgtctgt 7081 ccagaacaca ttgtttcaaa agtcttggac tttacctata tgctcattgg caaactgttg 7141 caaatagttt tgcaaaggct ttttcctggc acactcacat gcaggtcaac tttgtgcaat 7201 ctctttctga ttgtagaagc atgcactttg acaccaacag ttgcaagcct tactagcaga 7261 ttctgtgatg aaactttggg gttcttggag acatattttt tacttacttt tacaccacac 7321 acctcattca caagggaaga ccagatatga gaggggtata aatgagacag gttccacctg 7381 cattccctaa gcatgttcta atcactggca cccaatcttg aacacctgat tctaatttta 7441 tgtatcggaa ggtgtgataa atgtaaaggg gtatttactt ttacatttaa attgtgagaa 7501 ttaatacaaa atgtcaattc aatgtgtcat ttgatagagt gtatcaacct tattaataag 7561 cactgtttca aagaggatca aatgtttgct tctccaaata tgtcaaaaat aaataaataa 7621 aattccatgc agtatattta cttttacata tgactgtaat atgttattaa aaacatcatc 7681 tagcctacca taagtatact acaaataaat aacagtttta atgtcattaa ggatcaaaat 7741 aaatgtctaa tgaaaaaatt ataaagaaaa aaacagtttt aagccttttt agaatatgat 7801 agacatattt cttacacatg caaataatca acaccttgaa attgtcagaa atgtattgtg 7861 tgttttgtat tttgtttatt taatggcagg aaaactctga caatgtgtaa attcaaaaac 7921 tgtcccaata tatttgaatt caccataaaa aagagagata cttatatacc aatatatata 7981 tatatatata tatatatata tatatatata tatatatata tatatatata tatatatata 8041 tgaatataca gtatactttc atatattatt tcattatgtg agtaacaaag agaatatatt 8101 gctgtaccac atgataaatg gctacgtttt ttgatctaat cagttttaaa ttgtgatttc 8161 aggtgaaatg agtacagaaa ctacaaatgg aaataagttt ggtctgttct ctgtttcttc 8221 attatactgt tctgagttat actttctgtt attctctact aggtatttta aagctgtaaa 8281 tacttttgga catttaaatg ttggacattt ttttcatgca tttactcaaa tctcaaataa 8341 atatttgaca aaaatatgca attaaaagtc taattgtttt ctgtatcttt atttgaatta 8401 tagtcagcct taaagtatag tgtttatttt attagcttat attacatttc tatattttat 8461 tagtttttat t //