GenBank-Updates@genbank.bio.net (05/30/91)
LOCUS HUMTCRAJ7 1911 bp ds-DNA PRI 30-MAY-1991
DEFINITION Human DNA for T-cell receptor J-alpha SP region and pseudo-J-alpha
ACCESSION X05003
KEYWORDS T-cell receptor; T-cell receptor alpha; joining region.
SOURCE Homo sapiens DNA.
ORGANISM Homo sapiens
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae.
REFERENCE 1 (bases 1 to 1911)
AUTHORS Baer,R., Lefranc,M.-P., Minowada,J., Forster,A., Stinson,M.A. and
Rabbitts,T.H.
TITLE Organization of the T-cell receptor alpha-chain gene and
rearrangement in human T-cell leukaemias
JOURNAL Mol. Biol. Med. 3, 265-277 (1986)
STANDARD full automatic
COMMENT *source: clone=lambdaDalpha3; See also X02884 for TCR J(alpha)
gene.
From EMBL entry HSTCRAJ7; dated 07-JUN-1987.
FEATURES Location/Qualifiers
misc_feature 821..831
/note="conserved nonamer sequence of J region"
misc_feature 842..848
/note="conserved heptamer sequence"
CDS 859..918
/note="J-alpha-SP (AA 1-20)"
/codon_start=859
misc_feature 910..911
/note="RNA splice site"
misc_feature 1746..1805
/note="pseudo-J-alpha element"
misc_feature 1806..1807
/note="RNA splice site"
BASE COUNT 595 a 399 c 434 g 483 t
ORIGIN
1 gatctatagc aaacttgggg atatattgag aagcactcat tttccattcc tacaagctct
61 cttggtgact taaaatgttc ccatttctca tatgaaacac agaagtgcca agagccaatt
121 gcgtaaatga aaatctgagc agaataattt atagaaacat aaaaagagtt ccaaataatg
181 agtgctttca agcgaagctg ataatatcgg caccagataa tctgaacatt caggaaatta
241 gctaagtgcc cttgggggaa agagatgagt taatggcaaa cacaaattct cttttattgc
301 agcatgtagc taaattccct ggattggcta ataaacatgg tatgggatcc ctactcatag
361 aatcttcctc tctggagtta ggagagtttt cagcttcctc ctaagggtaa aagtggccca
421 gacccctaac tgaacggcaa gtataccaca tgcaattaca aggtatagag gcagcaatgt
481 agagggaggc ccacagacct ggggaaaatc tgggctctac tctcactggc tgttttcaat
541 aaagcctcca ctttctcagc agcaaaatga ctataactac atcataataa tatgagataa
601 tggccagaat gtaaaaagtg atcaataagt agtagctttt ctaaaatatt attataatta
661 ttattattga ggctttgctt atactaaggt ttacactatc ataaagggaa aggagaatcg
721 cttccttggg aaataaaaga tgtaagcaac aaagacccaa ggagcctttt agaatgttgc
781 tctgggaccc cagtggcttc cagcagatta gcatcaagaa ggttatctca aagaccttac
841 ccacagtggg ggtacagcag tgcttccaag ataatctttg gatcagggac cagactcagc
901 atccggccaa gtaagtagaa tgaagcagga gagcaaggga ggacggacaa ctatttcttc
961 tttgtccaaa atgccaactt gaacccaggt attttcctct gtgggctcca aaatggtttc
1021 ttccacccat ccccagaaaa tcctcccatc cagctctcgg tgctctgcag acatcatcct
1081 taggctggga ccttaggaac catgaggcag gcaatgagcg agtactcctg aaccttccac
1141 aaacatatcc aagatactgc tgcctggaat tgaggttttt gttctaggga attattggtt
1201 tattgaaatc atatgaagtc acaacctcag cccagggaat cacagcagaa tggaacagga
1261 ggagaacttt tgtatcagaa gcgaaatttc agtgcaaaag agcagaaggt ttaggcctgg
1321 cgggtggctc acgcctgtaa tcctagcact ttgggaggcc gaggcaggga gatcacaagg
1381 tcaggagatc aagaccatcc tggctaacac agtgaaaccc tatctctact aaaaatacaa
1441 aaattagccg ggcgtgatgg cacgcgcctg tagtctcagc tactcgggag actgaggcag
1501 gagaattgtt gaacccggga ggcagagatt gcagtgagct gagatcgcat cattgcactc
1561 cagcctgggc aacagagcaa gactccttct caaaaaaaca aaaaaaaaaa aaaaaaaaga
1621 aggtctaacc cttaggagtg tgattatcct gttctcctgc cttgtggggg agatcagtgt
1681 ttctcttatt taagtaatag gtaggtcctg tgagtttgtg caatggtgtc acctacggta
1741 tgaatactgg aggaacaatt gataaactca catttgggaa agggacccat gtattcatta
1801 tatctggtga gtcatcccag gtggcaccac gtgcaacccc atgggccagt gtcactaatc
1861 ctttctctgg agatatcact tattactatg gtgaggcttg ctgtagatgt t
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