GenBank-Updates@genbank.bio.net (05/30/91)
LOCUS HUMTCRAJ7 1911 bp ds-DNA PRI 30-MAY-1991 DEFINITION Human DNA for T-cell receptor J-alpha SP region and pseudo-J-alpha ACCESSION X05003 KEYWORDS T-cell receptor; T-cell receptor alpha; joining region. SOURCE Homo sapiens DNA. ORGANISM Homo sapiens Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia; Theria; Eutheria; Primates; Haplorhini; Catarrhini; Hominidae. REFERENCE 1 (bases 1 to 1911) AUTHORS Baer,R., Lefranc,M.-P., Minowada,J., Forster,A., Stinson,M.A. and Rabbitts,T.H. TITLE Organization of the T-cell receptor alpha-chain gene and rearrangement in human T-cell leukaemias JOURNAL Mol. Biol. Med. 3, 265-277 (1986) STANDARD full automatic COMMENT *source: clone=lambdaDalpha3; See also X02884 for TCR J(alpha) gene. From EMBL entry HSTCRAJ7; dated 07-JUN-1987. FEATURES Location/Qualifiers misc_feature 821..831 /note="conserved nonamer sequence of J region" misc_feature 842..848 /note="conserved heptamer sequence" CDS 859..918 /note="J-alpha-SP (AA 1-20)" /codon_start=859 misc_feature 910..911 /note="RNA splice site" misc_feature 1746..1805 /note="pseudo-J-alpha element" misc_feature 1806..1807 /note="RNA splice site" BASE COUNT 595 a 399 c 434 g 483 t ORIGIN 1 gatctatagc aaacttgggg atatattgag aagcactcat tttccattcc tacaagctct 61 cttggtgact taaaatgttc ccatttctca tatgaaacac agaagtgcca agagccaatt 121 gcgtaaatga aaatctgagc agaataattt atagaaacat aaaaagagtt ccaaataatg 181 agtgctttca agcgaagctg ataatatcgg caccagataa tctgaacatt caggaaatta 241 gctaagtgcc cttgggggaa agagatgagt taatggcaaa cacaaattct cttttattgc 301 agcatgtagc taaattccct ggattggcta ataaacatgg tatgggatcc ctactcatag 361 aatcttcctc tctggagtta ggagagtttt cagcttcctc ctaagggtaa aagtggccca 421 gacccctaac tgaacggcaa gtataccaca tgcaattaca aggtatagag gcagcaatgt 481 agagggaggc ccacagacct ggggaaaatc tgggctctac tctcactggc tgttttcaat 541 aaagcctcca ctttctcagc agcaaaatga ctataactac atcataataa tatgagataa 601 tggccagaat gtaaaaagtg atcaataagt agtagctttt ctaaaatatt attataatta 661 ttattattga ggctttgctt atactaaggt ttacactatc ataaagggaa aggagaatcg 721 cttccttggg aaataaaaga tgtaagcaac aaagacccaa ggagcctttt agaatgttgc 781 tctgggaccc cagtggcttc cagcagatta gcatcaagaa ggttatctca aagaccttac 841 ccacagtggg ggtacagcag tgcttccaag ataatctttg gatcagggac cagactcagc 901 atccggccaa gtaagtagaa tgaagcagga gagcaaggga ggacggacaa ctatttcttc 961 tttgtccaaa atgccaactt gaacccaggt attttcctct gtgggctcca aaatggtttc 1021 ttccacccat ccccagaaaa tcctcccatc cagctctcgg tgctctgcag acatcatcct 1081 taggctggga ccttaggaac catgaggcag gcaatgagcg agtactcctg aaccttccac 1141 aaacatatcc aagatactgc tgcctggaat tgaggttttt gttctaggga attattggtt 1201 tattgaaatc atatgaagtc acaacctcag cccagggaat cacagcagaa tggaacagga 1261 ggagaacttt tgtatcagaa gcgaaatttc agtgcaaaag agcagaaggt ttaggcctgg 1321 cgggtggctc acgcctgtaa tcctagcact ttgggaggcc gaggcaggga gatcacaagg 1381 tcaggagatc aagaccatcc tggctaacac agtgaaaccc tatctctact aaaaatacaa 1441 aaattagccg ggcgtgatgg cacgcgcctg tagtctcagc tactcgggag actgaggcag 1501 gagaattgtt gaacccggga ggcagagatt gcagtgagct gagatcgcat cattgcactc 1561 cagcctgggc aacagagcaa gactccttct caaaaaaaca aaaaaaaaaa aaaaaaaaga 1621 aggtctaacc cttaggagtg tgattatcct gttctcctgc cttgtggggg agatcagtgt 1681 ttctcttatt taagtaatag gtaggtcctg tgagtttgtg caatggtgtc acctacggta 1741 tgaatactgg aggaacaatt gataaactca catttgggaa agggacccat gtattcatta 1801 tatctggtga gtcatcccag gtggcaccac gtgcaacccc atgggccagt gtcactaatc 1861 ctttctctgg agatatcact tattactatg gtgaggcttg ctgtagatgt t //