GenBank-Updates@genbank.bio.net (05/30/91)
LOCUS MUSL1A1 7631 bp ds-DNA ROD 30-MAY-1991
DEFINITION Mouse L1Md-A13 repetitive sequence.
ACCESSION M29324
KEYWORDS L1 repetitive element.
SOURCE Mus musculus (strain BALB/c) DNA, clone CE113.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 7631)
AUTHORS Shehee,W.R., Chao,S.-F., Loeb,D.D., Comer,M.B., Hutchison,C.A.III.
and Edgell,M.H.
TITLE Determination of a functional ancestral sequence and definition of
the 5' end of A-type mouse L1 elements
JOURNAL J. Mol. Biol. 196, 757-767 (1987)
STANDARD full staff_entry
FEATURES Location/Qualifiers
repeat_unit 1092..1104
/rpt_type=5' direct
repeat_unit 1092..7489
/rpt_family="L1 repetitive element"
CDS 1837..2910
/note="ORF1"
/codon_start=1837
CDS 2894..6796
/note="ORF2"
/codon_start=2894
3'UTR 6794..7476
polyA_signal 7453..7458
repeat_unit 7477..7489
/rpt_type=3' direct
BASE COUNT 2813 a 1650 c 1520 g 1648 t
ORIGIN
1 ggaattcatg ctagttcact ttctttactt tatacatacc agggaatgac tccacccata
61 attaagaagg gtcttcccac atcaattatc ataatcaaga aaatccctca gaagcatttg
121 ccagaagccc attttctagg tggttataga tgctgtgaag ttgacaatca acagtaacca
181 tcacacctgc caaatgacat actttgacaa cataatgcac aagacatctt ttgtttatct
241 tcttagtggt gtgtaagtgg gatgtcaaca caatgctgtt gcccagcatc tacagattgt
301 atgctgtgta tccatagcca ggagaaagac cagagatcaa aaacttaaca ggttaatcct
361 gactgtgtaa cactgttata ccaaagtgaa tttgaaaacc ctaactctag acactatggt
421 aagttgagga ctatctgtgt gtgtgtgtat atatgtgtgt gtgtgtgtgt gtgtgtaata
481 tgtatatatg catgtgtgta tctatatcta tctagatata gatatagtta tagatcagca
541 agtgacttga tgcaaggcat gccagaatgg gcagggagaa caatagtaat aacagcaact
601 actactacaa aaatctcaga ttaggataag acatgaaatg atgaacatac atattttaca
661 tggtatattt gaagataatg agcactgaag ggaaagaaag atagagacaa aacagtcaca
721 ctgttggaca ttgcatcctt tattctgttt agcatttgga aacatactga attgccttct
781 gaagactttc ctttctttct ttctttcttt ctttctttct ttctttcttt ctttctttct
841 ttcctttttt taaatttctt tttaattttt tatagaactt tatttgcttg atttggcgtg
901 ttcatggcat caggcagagt gcacatagct gtggtgtatg gaaagggagc ctgtggaaag
961 gaaggggaga gggaggttct ctttacagtt tacaaatcta tcactaggaa agcaagctgt
1021 agctacctag tcaagaccta cagaagacca aaccagccca aatcctagca tggctgagag
1081 aggggctcaa gaacctacct ctagcccttc cgctcgactc gtgactcgag ccccgggcta
1141 ccttgccagc agagtcttgc ccaacacccg caagggtcca cacgggactc cccacgggac
1201 cctaagacct ctggtgagtg gatcacagtg cctgccccaa tccaatcgcg cggaacttga
1261 gactgcggta catagggaag caggctaccc gggcctgatc tggggcacaa gtcccttccg
1321 ctcgactcga gactcgagcc ccgggctacc ttgccagcag agtcttgccc aacacccgca
1381 agggtccaca cgggactccc cacgggaccc taagacctct ggtgagtgga acacagcgcc
1441 taccccaatc caatcgcgtg gaacttgaga ctgcggtaca tagggaagca ggcttccccg
1501 ggcttgatct ggggcacaaa ccccttccac tccactcgag ccccggctac cttgccagct
1561 gagtcgcctg acacccgcaa gggcccacac aggattccac acgtgatcct aagacctcta
1621 gtgagtggaa cacaacttct gccaggagtc tggttcgaac accagatatc tgggtacctg
1681 ccttgcaaga agagagcttg cctgcagaga atactctgcc cactgaaact aaggagagtg
1741 ctaccctcca ggtctgctca tagaggataa cagagtcacc tgaagaacaa gctcttaaca
1801 gtgacaacta aaacagctag cttcagagat taccagatgg cgaaaggcaa acgtaagaat
1861 cctactaaca gaaatcaaga ccgctcacca tcatcagaac gcagcactcc caccccacct
1921 agtcctgggc accccaacac aaccgaaaat ctagacccag atttaaaaac atttctcatg
1981 atgatgatag aggacatcaa gaaggacttt cataagtcac ttaaagattt acaggagagc
2041 actgctaaag agttacaggc tcttaaagaa aagcaggaaa acacagccaa acaggtgatg
2101 gaaatgaaca aaaccatact agaactaaaa ggggaagtag acacaataaa gaaaacccaa
2161 agcgaggcaa cgctggagat agaaacccta ggaaagagat ctggaaccat agatgcgagc
2221 atcagcaaca gaatacaaga aatggaagag agaatctcag gtgcagaaga ttccatagag
2281 aacatcgaca caacagtcaa agaaaataca aaatgcaaaa ggatcctaac tcaaaacatc
2341 caggtaatcc aggacacaat gagaagacca aacctacgga taataggaat tgatgagaat
2401 gaagattttc aacttaaagg gccagctaat atcttcaaca aaataataga agaaaacttc
2461 ccaaacataa aaaaagagat gcccatgatc atacaagaag catacagaac tccaaataga
2521 ctggaccaga aaagaaattc ctcccgacac ataataatca gaacaacaaa tgcactaaat
2581 aaagatagaa tattaaaagc agtaagggag aaaggtcaag taacatataa aggaaggcct
2641 atcagaatta caccagactt ttcaccagag actatgaaag ccagaagagc ctggacagat
2701 gttatacaga cactaagaga acacaaatgc cagcccaggc tactataccc ggccaaactc
2761 tcaattacca tagatggaga aaccaaagta ttccacgaca aaaccaagtt cacacaatat
2821 ctttccacga atccagccct tcaaaggata ataacagaaa agaagcaata caaggacgga
2881 aatcacgccc tagaacaacc aagaaagtaa tcattcaaca aaccaaaaag aagacagcca
2941 caagaacaga atgccaactc taacaacaaa aataaaaggg agcaacaatt acttttcctt
3001 aatatctctt aatatcaatg gactcaattc cccaataaaa agacatagac taacagactg
3061 gctacacaaa caggacccaa cattctgctg cttacaggaa acccatctca gggaaaaaga
3121 cagacactac ctcagagtga aaggctggaa aacaactttc caagcaaatg gactgaagaa
3181 acaagctgga gtagccattt taatatcgga taaaatcgac ttccaaccca aagttatcaa
3241 aaaagacaag gagggacact tcatactcat caaaggtaaa atcctccaag aggaactctc
3301 aattctgaat atctacgcac caaatgcaag ggcagccaca ttcattagag acactttagt
3361 aaagctcaaa gcatacattg cacctcacac aataatagtg ggagacttca acacaccact
3421 ttcttcaaag gacagatcgt ggaaacagaa actaaacagg gacacagtga aactaacaga
3481 agttatgaaa caaatggacc tgacagatat ctacagagca ttttatccta aaacaaaagg
3541 atataccttc ttctcagcac ctcacgggac cttctccaaa attgaccata taattggtca
3601 caaaacaggc ctcaatagat acaaaaatat tgaaattgtc ccatgtatcc tatcagacca
3661 ccatggccta agactgatct tcaatgacaa cataaataat ggaaagccaa cattcacgtg
3721 gaaactgaat aacactcttt tcaatgatac cttggtcaag gaaggaataa agaaagaaat
3781 taaagacttt ttagagttta atgaaaatga agccacaacg tacccaaacc tatgggacac
3841 aatgaaagca tttctaagag ggaaactcat agcgctgagt gcctccaaga agaaacggga
3901 gacagcacat actagcagct tgacaacaca tctaaaagcc ctagaaaaaa aggaagcaca
3961 ttcacccaag aggagtagac ggcaggaaat aatcaaactc aggggtgaaa tcaaccaagt
4021 ggaaacaaga agaactattc aaagaattaa ccaaacgagg agttggttct ttgagaaaat
4081 caacaagata gataaaccct tagctagact cactaaaggg cacagggaca aaatcctaat
4141 taacaaaatc agaaatgaaa agggagacat aacaacagat cctgaagaaa tccaaaacac
4201 catcagatcc ttctacacaa ggctatactc aacaaaactg gaaaacctgg acgaaatgga
4261 caaatttctg gacagatacc aggtaccaaa gttgaatcag gatcaagttg accatctaaa
4321 cagtcccata tcacctaaag aaatagaagc agttattaat agtctcccaa ccaaaaaaag
4381 cccaggacca gatgggttta gtgcagagtt ctatcagacc ttcaaagaag atctaattcc
4441 aattctgcac aaactatttc acaaaataga agtagaaggt actctaccca actcatttta
4501 tgaagccact attactctga tacctaaacc acagaaagat ccaacaaaga tagagaactt
4561 cagaccaatt tctcttatga atatcgatgc aaaaatcctc aataaaattc tcgctaaccg
4621 aatccaagaa cacattaaag caatcatcca tcctgaccaa gtaggtttta ttccagggat
4681 gcagggatgg tttaatatac gaaaatccat caatgtaatc cattatataa acaaactcaa
4741 agacaaaaac cacatgatca tctcgttaga tgcagaaaaa gcatttgaca agatccaaca
4801 cccattcatg ataaaagttt tggaaagatc aggaattcaa ggcccatacc taaacatgat
4861 aaaagcaatc tacagcaaac cagtagccaa catcaaagta aatggagaga agctggaagc
4921 aatcccacta aaatcaggga ctagacaagg ctgcccactt tctccctacc ttttcaacat
4981 agtacttgaa gtattagcca gagcaattcg acaacaaaag gagatcaagg ggatacaaat
5041 tggaaaagag gaagtcaaaa tatcactttt tgcagatgat atgatagtat atataagtga
5101 ccctaaaaat tccaccagag aactcataaa cctgataaac agcttcggtg aagtagctgg
5161 atataaaata aactcaaaca agtcaatggc ctttctctat acaaagaata aacaggctga
5221 gaaagaaatt agggaaacaa cacccttctc aatagtcaca aataatataa aatatcttgg
5281 cgtgactcta actaaggagg tgaaagatct gtatgataaa aacttcaaat ctctgaagaa
5341 agaaattaaa gaagatctca gaagatggaa agatctccca tgctcatgga ttggcaggat
5401 caacattgta aaaatggcta tcttgccaaa agcaatctac agattcaatg caatccccat
5461 caaaattcca actcaattct tcaacgaatt ggaaggagca atttgcaaat ttgtctggaa
5521 taacaaaaaa cctaggatag caaaaagtct tctcaaggat aaaagaactt ctggcggaat
5581 caccatgcca gacctaaagc tttactacag agcaattgtg ataaaaactg catggtactg
5641 gtatagagac agacaagtag accaatggaa tagaattgaa gatccagaaa tgaacccaca
5701 cacctatggt cacttgatct tcgacaaggg agctaaaacc atccagtgga agaaagacag
5761 cattttcaac aattggtgct ggcacaactg gttgttatca tgtagaagaa tgcgaatcga
5821 tccatactta tctccttgta ctaaggtcaa atctaagtgg atcaaggaac ttcacataaa
5881 accagagaca ctgaaactta tagaggagaa agtggggaaa agccttgaag atatgggcac
5941 aggggaaaaa ttcctgaaca gaacagcaat ggcttgtgct gtaagatcga gaatcgacaa
6001 atgggaccta atgaaactcc aaagtttctg caaggcaaaa gacaccgtca ataagacaaa
6061 aagaccacca acagattggg aaaggatctt tacctatcct aaatcagata ggggactaat
6121 atccaacata tataaagaac tcaagaaggt ggacttcaga aaatcaaata accccattaa
6181 aaaatggggc tcagaactga acaaagaatt ctcacctgag gaataccgaa tggcagagaa
6241 gcacctgaaa aaatgttcaa catccttaat catcagggaa atgcaaatca aaacaaccct
6301 gagattccac ctcacaccag tcagaatggc taagatcaaa aattcaggtg acagcagatg
6361 ctggcgagga tgtggagaaa gaggaacact cctccattgt tggtgggagt gcaggcttgt
6421 acaaccactc tggaaatcag tctggcggtt cctcagaaaa ctggacatag tactaccgga
6481 ggatccagca atacctctcc tgggcatata tccagaagat gccccaacag gtaagaagga
6541 cacatgctcc actatgttca tagcagcctt atttataata gccagaagct ggaaagaacc
6601 tagatgcccc tcaacagagg aatggataca gaaaatgtgg tacatctaca caatggagta
6661 ctactcagct attaaaaaga atgaatttat gaaattccta gccaaatgga tggacctgga
6721 gggcatcatc ctgagtgagg taacacattc acaaagaaac tcacacaata tgtattcact
6781 gataagtgga tattagcccc aaacctagga tacccaagat ataagatata atttgctaaa
6841 cacatgaaac tcaaggagaa tgaagactga agtgtggaca ctatgcccct ccttagattt
6901 gggaacaaaa cacccatgga aggagttaca gagacggagt ttggagctga gatgaaagga
6961 tggaccatgt agagactgcc atagccaggg atccacccca taatcagcat ccaaacgctg
7021 acaccattgc atacactagc aagattttat tgaaaggacg cagatgtagc tgtctcttgt
7081 gagactatgc cggggcccag caaacacaga agtggatgct cacagtcagc taatggatgg
7141 atcatagggc tcccaatgga ggagctagag aaagtagcca aggagctaaa gggatctgca
7201 accctatagg tggaacaaca ttatgagcta accagtaccc cggagctctt gactctagct
7261 gcatatatat caaaagatgg cctagtcggc catcactgga aagagaggcc cattggactt
7321 gcaaacttta tatgccccag tacaggggaa taccagggcc aaaaaggggg agtgggtggg
7381 caggggagtg ggggtgggtg gatatggggg acttttggta tagcattgga aatgtaaatg
7441 agttaaatac ctaataaaaa atggaaaaaa aaaaaaaacc tacctctagc tggtagctat
7501 tggcctatgg aggcctgttg ggagagattc cgttttcttc aaagatgtgt cacctagtac
7561 tactcacatt ctagtagact gtcccatacc caggtaccag tactcaatga gagagagaga
7621 gagagagaga a
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