GenBank-Updates@genbank.bio.net (05/30/91)
LOCUS MUSL1M9 5237 bp ds-DNA ROD 30-MAY-1991
DEFINITION Mouse L1Md-9 repetitive sequence.
ACCESSION M29325
KEYWORDS L1 repetitive sequence.
SOURCE Mus musculus domesticus (strain BALB/c) DNA, clone BA4.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 5237)
AUTHORS Shehee,W.R., Chao,S.-F., Loeb,D.D., Comer,M.B., Hutchison,C.A.III.
and Edgell,M.H.
TITLE Determination of a functional ancestral sequence and definition of
the 5' end of A-type mouse L1 elements
JOURNAL J. Mol. Biol. 196, 757-767 (1987)
STANDARD full staff_entry
FEATURES Location/Qualifiers
repeat_unit 893..904
/rpt_type=5' direct
repeat_unit 893..5237
/rpt_family="L1 repetitive element"
/partial
CDS 1429..1995
/note="ORF1"
/codon_start=1429
BASE COUNT 2050 a 1143 c 890 g 1154 t
ORIGIN
1 ttaacaattt tgattgtcat ttcacacaga taaaaatatt gaaaagaaat catgatcaga
61 actgagactt tcaaaaaccc aagaatcatc tatctcatag tctcccttat atacaaggct
121 aaattaggct gatatggcca cttcttttta taatcacaga agtacttagg tggtcttaaa
181 acttttgtgg ctggagttta atctgaggaa taataccatc aaccatattg cagctctaac
241 ataaatacta cagtagccag tgaagtagta cacaggaaac catcacagaa gccttcccag
301 taagcagaac tgctcatttc gccaccattc ttgtcatata tgaagttatg agggctttaa
361 gagattctaa tttgtataga tttatttata tttatactgt gttcctattg tttttttatt
421 tacctggtaa acagaacata acaatgatct gtgccagtgt acattcatag taactctgct
481 gttatacact gacatgtata aataacaaac tacactgaat atgttatgtt tattttatag
541 cttttgtttc tttgtttttg agattataat ttaattataa tgtttcttcc tcctctctat
601 ccccaaacaa cctcaaataa ctctcacaac tctccttcaa attctctttt catcagtatt
661 attgcacaca tatatggatg tgtatagatg gtttgttgtg tcaggctgag tgcaaatgct
721 ctcttatatc catctatttt ttcctgtaca tggagctgtg cataggtact gagacctctt
781 cacttctggg gaagtcccaa tacatcacag gcttgtagga cagatacaga actactccag
841 attcacttca agaatcttaa tcttacattc ctgagcatac taaaatcttc ataaaaatca
901 ggcagcacaa gtccctcccg cccctctcga gcaccgggat acctcgccag cggagtcgac
961 caacacccgc aagggcccac acaggattcc ccacgggatc ctaagacctc tggtgagtgg
1021 aacacagcgt ctgccacaat ccaatcgagc ggaacctgag actgcaggaa atagggaagc
1081 agactacccg ggcctgaccc gggccacaag tcccttccac tccactcgag cactggagtg
1141 ccttgccatc ggaatcgcct gacacccgca agagcccaca caggattccc aacgggatcc
1201 taagacctct agtgagtgga acacaatttc tgccaggagg caggttcgaa caacagatat
1261 ctgggtacct tccctgcaag aagagagctt gcctgcagag aatactctgc ccactgaaat
1321 taaggagaga gctagcctcc caggtctgct tatagaggct aacagagtca cctgaagaac
1381 aagctcttac cagagacaac tataacagct agcttcagag attaccagat ggtgaaaggc
1441 aaacgtaaga atcctactaa cagaaatcaa gaccactcac catcatcaga acgcagcact
1501 cccaccccac ctagtcctgg gcaccccaac acaaccgaaa atctagaccc agatttaaaa
1561 acatttctca tgatgatgat agaggacatc aagaaggact ttctcaaatc acttaaagaa
1621 ttacaggaga gcactgctaa agagttacag gcccttaaag aaaagcagga aaacacaacc
1681 aaacaggtag aagtccttaa agaaaaacag gaaaacacat ccaaacagat gatggaaatg
1741 aacaaaacca tactagaact aaaaagggaa gtagatacaa taaagaaaac ccaaagcaag
1801 gcaacgctga agatagaaac cctaggaaag agatctggaa ccatagatgc gagcatcagc
1861 aacagaatac aagaaatgga agagagaatc tcaggtgcag aagattccat agagaacatc
1921 aacacaacag tcaaagaaaa tacaaaatgc aaaaggatcc taactcaaaa tatcaggaaa
1981 tccaggacac aatgagaaga ccaaacctac ggataataag agttgatgag aatgaagatt
2041 ttcaacttaa agggccagct aatatcttca acaaaataat agaagaaaac ttcccaaaca
2101 taaagaaaga gatgcccatg atcatacaag aagcctacaa aactccaaat aaactggacc
2161 agaaaagaaa ttcctcccaa cacataataa tcagaacaac aaatgcacta aataaagaga
2221 gaatattaaa aggagtaagg gagaaaggtc aaataacata taaaggaagg cctatcagaa
2281 ttacaccaga cttttcacca gagactatga aagccagaag agcctggaca gatgttatac
2341 agacactaag agaacacaaa tgccagccca ggctactata cccggccaaa ttctcaatta
2401 ccatagatgg agaaaccaac gtattccaca acaaaaccaa attcacacat tatctctcca
2461 cgaatccagc ccttcaaagg ataataacag aaaagaagca atacaaggac agaaatcacg
2521 ccctagaaca agcaagaaag taatccctca acaaaccaaa aagaagacag ccacaagaac
2581 agaatgccaa ctctaacaac aaaaataata ggaagaaaca attacttttc cttaatatct
2641 cttaatatca atggactcaa tttcccaata aaaagacata gactaacaga ctggctacac
2701 aaacaggacc caacattctg ctgcttacag gaaacccatc tcagggaaaa agacagacac
2761 tacctcagag tgaaaggctg gaaaacaatt ttccaagcaa atggtctgaa gaaacaaggt
2821 ggagtagcca ttctaatatc ggataaaatc gacttccaac ccaaagttat caaaaaagac
2881 aaggagggac acttcatact catcaaaggt aaaaacctcc aagaggaact ctcaattctg
2941 aatatctacg ctccaaatgc aagggcagcc acattcatta aagatacttt agtaaagctc
3001 aaagcacaca ttgcacctca cacaatagta gtgggagact tcaacacacc actttcatca
3061 atggacagat cgtggaaaca gaaactaaac agggacacag tgaaactaac agaagttatg
3121 aaacaaatgg acgtgacaga tatctacaga acattttatc ctaaaacaaa aggatatacc
3181 ttcttctgag cacctcacgg gaccttctcc aaaattgacc atataatagg tctcaaaaca
3241 ggcctcaaca gatacaaaag tattgaaatt gtcccatgca tcctatcaga ccaccacagc
3301 ctaagactga tcttcaacaa taacataaat aatggaaagt caacattcac gtggaaactg
3361 aacaacactc ttctcaatga taccttggtc aaggaaggaa taaagaaaga aattaaagac
3421 tttttagagt ttaatgaaaa tgaagctaca acgtaccaaa acctatggga cacaatgaaa
3481 gcatttctaa gagggaaact catagctctg agtgcctcca agaagaaacg ggagagagca
3541 catactagca gcttgacaac acatctaaaa gctctagaaa aaaaggaagc aaattcacgc
3601 aagaggagta gatggcagga aataatcaaa ctcaggggtg aaatcaacca agtggaaaca
3661 agaagaacta ttcaaagaat taaccaaatg aggagttggt tctttgagaa aatcaacaag
3721 atagataaac ccttagctag actcactaga gggcacagcg acaaaatcct aattaacaaa
3781 atcagaaatg aaaagggaga cataacaaca gatcctgaag aaatccaaaa caccatcaga
3841 tccttctaca aaaggttata ctcaacaaaa ctggaaaacc tggacgaaac ggagaaattt
3901 ctggacagat accaggtacc aaagttgaat caggatcaat ttgaccatct aaacagtccc
3961 atatccccta aagaaatata agcagttatt aatagtctcc cagccaaaaa aagcccagga
4021 ccagatgggt ttagtgcaga gttctatcag accttcaaag aagatctaat tccagttctg
4081 cacaaactat ttcacaaaat agaagtagaa ggtactctac ccaactcatt ttatgaagcc
4141 acaattactc tgatacctaa actacagaaa gatccaacaa agatagagaa cttcagacca
4201 atttccctta taaatatcga tgcaaaaatc ctcaataaaa ttctcgccaa ccgaatccaa
4261 gaacacatta aagcaatcat ccatcctgac caagtaggtt ttattccagg gatgcaggga
4321 tggtttaata tacaaaaatc catcaatgta atccattata taagcaaact caaagacaaa
4381 aaccacatga tcatctcatt agatgcagaa aaagcatttg acaagatcca acacccattc
4441 atgataaaag tcttggaaag atcaggaatt caaggcccat gcctaaacat gataaaagca
4501 atctacagca aaccagtagc caacatcaaa gtaaatggag agaagctgga agcaatccca
4561 ctaaaatcag ggactagaca aggctgccca ctttctccct accttttcaa catagtactt
4621 gaagtattag ccagagcaat tcgacaacaa aaggagatca agggaataca aattggaaaa
4681 gaggaagtca aaatatcact ttttgcagat gatatgatag tatatatata agtgacccta
4741 aaaattccac cagagagctc ataaacctga taaacagctt cggtgaagta gctgaatata
4801 aaataaacta aaactagtca atggcctttc tctacacaaa gaataaacag gctgagaaag
4861 aaattaggga aacaacaccc ttttcaatag tcacaaataa tataaaatat ctcagcatga
4921 ctctaactaa ggaagtgaaa gatctgtatg ataaaaactt caagtctctg aagaaagaaa
4981 ttaaagaaga tctcagaaga tggaaagatc tcccatgctc atggattggc aggatcaaca
5041 ttgtaaaaat ggctatcttg caaaaagcaa tctacagatt caattcaatc cctatcaaaa
5101 ttccaactca attcttcaac gaattagaag gaacaatttg caaattcatc tggaataaca
5161 aaaaacctag gatagcaaaa actcttctca aggataaaag aacctctggt ggaatcacca
5221 tgcctgacct aaagctt
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