GenBank-Updates@genbank.bio.net (05/30/91)
LOCUS COBS 4200 bp ss-RNA VRL 30-MAY-1991 DEFINITION Bovine enteric coronavirus, spike glycoprotein gene. ACCESSION D00731 KEYWORDS S protein; spike glycoprotein. SOURCE Bovine enteric coronavirus (strain F15) grown in HRT18 cells, cDNA to viral RNA, clones P G7, P G7 8, P G7 8 12, P 27 40, and P 33 23. ORGANISM Bovine coronavirus Viridae; ss-RNA enveloped viruses; Positive strand RNA virus; Coronaviridae. REFERENCE 1 (bases 1 to 4200) AUTHORS Boireau,P., Cruciere,C. and Laporte,J. TITLE Nucleotide sequence of glycoprotein S gene of bovine enteric coronavirus and comparison with the S proteins of two mouse hepatitis virus strains JOURNAL J. Gen. Virol. 71, 487-492 (1990) STANDARD full staff_review COMMENT The predicted protein has 19 N-glycosylation sites (specific for the Asn-X-Ser/Thr sequence). FEATURES Location/Qualifiers misc_signal 23..32 /note="conserved intergenic sequence" CDS 31..4122 /note="spike glycoprotein precursor" sig_peptide 31..81 /note="spike glycoprotein signal peptide (putative)" mat_peptide 82..4119 /note="spike glycoprotein mature peptide" misc_feature 2334..2335 /note="tryptic cleavage site (putative)" misc_feature 3943..4038 /note="C-terminal membrane anchoring domain" BASE COUNT 1176 a 684 c 819 g 1521 t ORIGIN 514 bp upstream of AccI site. 1 gctgcatgat gcttagacca taatctaaac atgtttttga tacttttaat ttccttacca 61 atggctcttg ctgttatagg agatttaaag tgtactacgg tttccattaa tgatgttgac 121 accggtgttc cttctattag cactgatact gtcgatgtta ctaatggttt aggtacttat 181 tatgttttag atcgtgtgta tttaaatact acgctgttgc ttaatggtta ctaccctact 241 tcaggttcta catatcgtaa tatggcactg aagggaactt tactattgag cacactatgg 301 tttaaaccac cttttctttc tgattttatt aatggtattt ttgctaaggt caaaaatacc 361 aaggttatta aacatggtgt aatgtatagt gagtttcctg ctataactat aggtagtact 421 tttgtaaata catcctatag tgtggtagta caaccacata ctaccaattt agataataaa 481 ttacaaggtc tcttagagat ctctgtttgc cagtatacta tgtgcgagta cccaaatacg 541 atttgtcatc ctaatttggg taatcggcgc gtagaactat ggcattggga tacaggtgtt 601 gtttcctgtt tatataagcg taacttcaca tatgatgtga atgctgatta tttgtatttc 661 catttttatc aagaaggtgg tactttttat gcatatttta cagatactgg tgttgttact 721 aagtttctgt ttaatgttta tttaggcacg gtgctttcac attattatgt catgcctttg 781 acttgtaata gtgctatgac tttagaatat tgggttacac ctctcacttc taaacaatat 841 ttactcgctt tcaatcaaga tggtgttatt tttaatgctg ttgattgtaa gagtgatttt 901 atgagtgaga ttaagtgtaa aacactatct atagcaccat ctactggtgt ttatgaatta 961 aacggttaca ctgttcagcc aattgcagat gtttaccgac gtatacctaa tcttcccgat 1021 tgtaatatag aggcttggct taatgataag tctgtgccct ctccattaaa ttgggaacgt 1081 aagacctttt caaattgtaa ttttaatatg agcagcctga tgtcttttat ccaggcagac 1141 tcatttactt gtaataatat tgatgctgct aagatatatg gtatgtgttt ttccagcata 1201 actatagata agtttgctat acccaatggt aggaaggttg acctacaatt gggcaatttg 1261 ggctatttgc agtcttttaa ctatagaatt gatactactg ctacaagttg tcagttgtat 1321 tataatttac ctgctgctaa tgtttctctc agcaggttta atccttctat ttggaatagg 1381 agatttggtt ttacagaaca atctgttttt aagcctcaac ctgtaggtgt ttttactgat 1441 catgatgttg tttatgcaca acattgtttt aaagctccca caaatttctg tccgtgtaaa 1501 ttggatgggt ctttgtgtgt aggtaatggt cctggtatag atgctggtta taaaaatagt 1561 ggtataggca cttgtcctgc aggcactaat tatttaactt gccataatgc tgcccaatgt 1621 aattgtttgt gcactccaga ccccattaca tctaaatcta cagggcctta caagtgcccc 1681 caaactaaat acttagttgg cataggtgag cactgttcgg gtcttgctat taaaagtgat 1741 tattgtggag gtaatccttg tacttgccaa ccacaagcat ttttgggttg gtctgttgac 1801 tcttgtttac aaggggatag gtgtaatatt tttgctaatt ttattttgca tgatgttaat 1861 agtggtacta cttgttctac tgatttacaa aaatcaaaca cagacataat tcttggtgtt 1921 tgtgttaatt atgatcttta tggtattact ggccaaggta tttttgttga ggctaatgcg 1981 acttattata atagttggca gaacctttta tatgattcta atggtaatct ctatggtttt 2041 agagactact taacaaacag aacttttatg attcgtagtt gctatagcgg tcgtgtttca 2101 gcggcctttc atgctaactc ttccgaacca gcactgctat ttcggaatat taaatgcaat 2161 tacgttttta ataatactct ttcacgacag ctgcaaccta ttaactattt tgatagctat 2221 cttggttgtg ttgtcaatgc tgataatagt actgctagtg ctgttcaaac atgtgatctc 2281 acagtaggta gtggttactg tgtggattac tctacaaaaa gacgaagcgt aagagcgatt 2341 accactggtt atcggtttac taattttgag ccatttactg ttaattcagt aaatgatagt 2401 ttagaacctg taggtggttt gtatgaaatt caaatacctt cagaatttac tataggtaat 2461 atggaggagt ttattcaaac aagctctcct aaagttacta ttgattgttc tgcttttgtc 2521 tgtggtgatt gtgcagcatg taaatcacag ttggttgaat atggtagttt ctgtgacaat 2581 attaatgcta tactcacaga agtaaatgaa ctacttgaca ctacacagtt gcaagtagct 2641 aatagtttaa tgaatggtgt cactcttagc actaagctta aagatggcgt taatttcaat 2701 gtagacgaca tcaatttttc ccctgtatta ggttgtttag gaagcgaatg taataaagtt 2761 tccagtagat ctgctataga ggatttactt ttttctaaag taaagttatc tgatgtcggt 2821 ttcgttgagg cttataataa ttgtactggg ggtgccgaaa tcagggacct catttgcgtg 2881 caaagttata atggtatcaa agtgttgcct ccactgctct cagaaaatca gatcagtgga 2941 tacactttgg ctgctacctc tgctagtctg tttcctcctt ggtcagcagc agcaggtgta 3001 ccattttatt taaatgttca gtatcgtatt aatgggattg gtgttaccat ggatgtgcta 3061 agtcaaaatc aaaagcttat tgctaatgca tttaacaatg ctcttgatgc tattcaggaa 3121 gggtttgatg ctaccaattc tgctttagtt aaaattcaag ctgttgttaa tgcaaatgct 3181 gaagctctta ataacttatt gcaacaactc tctaatagat ttggtgctat aagttcttct 3241 ttacaagaaa ttctatccag acttgatgct cttgaagcgc aacgtcagat agacagactt 3301 attaatgggc gtttcaccgc tcttaatgct tatgtttctc aacagcttag tgattctaca 3361 ctagtaaaat ttagtgcagc acaagctatg gagaaggtta atgaatgtgt caaaagccaa 3421 tcatctagga taaatttttg tggtaatggt aatcatatta tatcattagt gcagaatgct 3481 ccatatggtt tgtattttat ccattttagc tatgtcccta ctaagtatgt caccgcgaag 3541 gttagtcccg gtctgtgcat tgctggtgat agaggtatag cccctaagag tggttatttt 3601 gttaatgtaa ataacacttg gatgttcact ggtagtggtt attactaccc tgaacctata 3661 actggaaata atgttgttgt tatgagtacc tgtgctgtta attacactaa agcgccggat 3721 gtaatgctga acatttcaac acccaacctc cctgatttta aggaagagtt ggatcaatgg 3781 tttaaaaacc aaacatcagt ggcaccagat ttgtcacttg attatataaa tgttacattc 3841 ttggacctac aagatgaaat gaataggtta caggaggcaa taaaactttt aaatcagagc 3901 tacatcaatc tcaaggacat tggtacatat gagtattatg taaaatggcc ttggtatgta 3961 tggcttttaa ttggctttgc tggtgtagct atgcttgttt tactattctt catatgctgt 4021 tgtacaggat gtgggactag ttgttttaag aaatgtggtg gttgttgtga tgattatact 4081 ggacaccagg agttagtaat taaaacatca catgacgact aagttcgtct ttgatttatt 4141 ggctcctgac gatatattac atcccttcaa tcatgttaag ttaattatta taagcccatt //