GenBank-Updates@genbank.bio.net (05/30/91)
LOCUS MUSQ89D 6089 bp ds-DNA ROD 30-MAY-1991
DEFINITION Mouse Q8/9d gene.
ACCESSION D90146
KEYWORDS Q8/9d; Qa-2 cell surface antigen.
SOURCE Mouse (strain BALB/c; haplotype H2-d) adult liver DNA, clone 46.1.
ORGANISM Mus musculus
Eukaryota; Animalia; Metazoa; Chordata; Vertebrata; Mammalia;
Theria; Eutheria; Rodentia; Myomorpha; Muridae; Murinae.
REFERENCE 1 (bases 1 to 1200)
AUTHORS Nakayama,K.-.
JOURNAL Unpublished (1990)
STANDARD full staff_entry
REFERENCE 2 (bases 1201 to 6089)
AUTHORS Nakayama,K.-., Tokito,S., Nakauchi,H. and Gachelin,G.
TITLE Gene Q8/9d of the BALB/c mouse MHC cannot code for the Qa-2,3 cell
surface class I antigen
JOURNAL Immunogenetics (1991) In press
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Kei-ichi Nakayama
Lab. for Molecular Regulation of Aging Frontier Research Program
RIKEN
3-1-1 Koyadai
Tsukuba, Ibaraki 305
Japan
Phone: 0298-36-3722
Fax: 0298-36-9090
FEATURES Location/Qualifiers
CDS join(1288..1351,1519..1788,1978..2198)
/note="Q8/9d peptide"
exon 1288..1351
/note="Q8/9d peptide, exon 1"
precursor_RNA 1288..>5340
/note="mRNA and introns"
intron 1352..1518
/note="intron"
exon 1519..1788
/note="Q8/9d peptide, exon 2"
intron 1789..1977
/note="intron"
exon 1978..2198
/note="Q8/9d peptide, coding region of exon 3"
intron 2247..4265
/note="intron"
intron 4542..4668
/note="intron"
intron 4787..4957
/note="intron"
intron 4985..5339
/note="intron"
misc_signal 5739..5744
/note="polyadenylation signal"
BASE COUNT 1376 a 1589 c 1591 g 1533 t
ORIGIN chromosome 17.
1 caggacctgg aactctgggc caactcaata ttatcagaac catgtcccac acagctgtga
61 cattcatgtc ctcacctcat cagtcatacg tgtgagtgaa ggtcagggag ggagggagag
121 ggtcagaaat tacatagctt ctaccatact atcatattta ttctgtgtta tagttggtga
181 cagttcctct cctactgtga ttgagtcact aaagcaactg caccttggaa gtgcagaaat
241 agagaagtgc agtggagaca gcgatcagtg ccatgctgtc tgtggtctgc acaggggtct
301 ctcttcagtg gacaagggga tctcctgtgc tgagtcccag gtctacacag acaaactcag
361 aaggaagatc tttgttttaa aaaacaaaaa caaaacaaag attccgggcg tggtggcaca
421 tgcctttaat cccagcacgt gggaggcaga ggcaggtgga tttctgagtt cgaggccagc
481 ctggagtaca aagtgagttc caggacagcc agtgctatac agaaaaaccc tatctcaaaa
541 aaacaaaaaa aaccaaagaa gaaacaaaca aacaaacaaa caaacaaaca aaaaccctgc
601 agccacagct cttcaactag gaggtaacac aaggaatctg tgagaagaca gatcctgagg
661 agagaggcga agtctacact taactgatga gagtcctgca ctcaggcttg gcagtgtgag
721 ctgcccattg caggtgaaca gagcctggtc tctgtggagt ccatgtgggg ctttgcagac
781 cagcgcctct gctttaagga gaagcctatc ttcactgcat ccccaagtgc ttgtgtctcc
841 attgtattcc cagaagtggc atttcttcta gaagactcca aggtctgact tctgaagaga
901 agaaggaaga ggaagagtgg aggatagggc acagagagta tggcctgcgg gtctctcctg
961 gtgtcctgac agcttctgga tcagaactcg gagacaccat gacaaacagc tctctgtccc
1021 cggcacaggg ttcaggcaaa gtcttaatct ccaggctgtg aggtcaaggg tggggaagcc
1081 catggctggg gattccccat ctccccagtt tcacttctgc tcctaacctg ggtcagttca
1141 ttctgccagg acactgatga cgtgtaacag ttctcacccc tattgggtga ggtgatcacc
1201 gggaaccaat cagcgtcggc gcgcgagcgg gttgtaaagt ccacgctgcc cacaggagtc
1261 agtcgaccgg aatccccgag aggagcaatg gctctaacaa cgctgctctt ggtggtggcg
1321 gccgccctga ccctgatcga gacccgcgcg ggtgagtgcg gggtcgggag ggaaacagcc
1381 cctgtgccgc gtccccgctt cgcccaccgg acctccgccc cttctccacc cgagccccga
1441 gccctgctcc actcccggcc cgcgtacccg accggggtcc cgggaggagg tcggggtctc
1501 accgcgcgcc gcccccaggc ccacactcgc tgcggtattt ccacaccgct gtgtcccggc
1561 ccggactcgg ggagccccgg ttcatcatcg tcggctacgt ggacgacacg cagttcgtgc
1621 gcttcgacag agacgcggaa aatccgagga tggagccgcg ggcgcggtgg atggagcagg
1681 aggggccgga gtattgggag cgggagacac agatcgccaa gggccatgag cagagtttcc
1741 aagggagcct gaggactgca cagagctact acaaccagag caagggcggt gagtgacccc
1801 gggtcggagg tcactacctc tccacgtccc gaaacagagg ccggtgaggt cccgggtgca
1861 aagtccgagg ttcaggagca gaactgaccc aggactggat tccctttcag tttggaggag
1921 tccgcggtgg gggggtgggg ggggggcgga ggagggactg accactgggt cccgcaggct
1981 ctcacacact ccagtggatg tatggctgtg acatggggtc cgacgggcgc ctcctccgcg
2041 ggtacctgca gttcgcctat gaaggccgcg attacatcgc cctgaacgaa gacctgaaaa
2101 cgtggacggc ggcggacatg gaggcacaga tcacccgacg caagtgggag caggctggta
2161 ttgcagagag agaccgggcc tacctggagg tcgcgtgagg ctccgcagat acctgcagct
2221 cgggaaggag acgctgctgc gcacaggtgc aggggccgcg ggcagctcct ccctctgccc
2281 tcaggctggg gctcagtcct ggggaagaag aaaccctcag ctggggtggt gcccctggct
2341 cagaggggag agagtgaccc tgggtctcct gatccctcat cacagtgact gcactgactc
2401 tcccagggct cagccttctc cctggacagt gcccaggctg tctcaggagg gaaggagaga
2461 atttccctga ggtaacaaca gctgctccct tcagttcccc tgtagcctct gtcagccatg
2521 gcctctccca ggccagggtt ctcagcctac acccactgtc tgtagacact gactcctgtc
2581 ctgctgagtg tgtcagccct tacacctcat gacctgaagt ctcctttacc cgatgggaga
2641 catggacatc tacactaggc tggttccccc agtttctaga actttccaaa gaatacagtc
2701 taccagatcc ttccctgtct gtggggtttg catcctttga cacccaattc tatctattcc
2761 tgcaatggtg aatagtcaca tgagccatta tgggttaccc taaacaaata cttttcttgt
2821 gtttttcccc tctcgttttc tttttatctt tacttttttt ttaagggtat tatgttgctt
2881 ataatcggtt tttcttcggc actggaatga tattgctctc tctccccacc atacccccac
2941 ccccgcctat atcatttgta tcagtagccc tggctgtcgt ggaactcact ctgtagacca
3001 ggctggcctt gaactcagaa atcagcctgc ctctgtctct gcctctgcct cccaagtgct
3061 gggattaaag gcttgggcca ccaccactgg gcagaagaaa ggttcctgtg agcttaaaat
3121 gttttctggc agaattaacc atccagatca ctcctgatat ccctgtgccc caccaagtta
3181 cagtgctccc cctggtgaat cagaacttgg actctgagag acagggtctt ctgcaatcca
3241 ggcctgagtg agagggaaga ccacacaccc tgtgagccca ctgtgttcca gtgagtgctg
3301 cactggggtc cacagcacat tccagggatc ctgtgtgaca catctgtacc ttgtccccca
3361 gagtcagggg ctgggagtca ttttctctgg ctgagtgtca gaggttcacc acatttctgc
3421 tacacactcc ctgatggctg tttacttgga ctgacagtta atgttggtca gcaagatgac
3481 cacagtggtt tagtctcaat ggtgtcactc ttccagtagc atatggtcct gatttctaat
3541 ttagatacga actcaaacac atatgaaatt tcttattttc cattccatct tccattatat
3601 agctacctat ctcgtgctat tgaacatcac ataaggatga ccatgttgac ccactggctc
3661 atgtggattc cctcttagct tctgagtccc ctcaggaaaa tgtgcagtcc tgtgctgagg
3721 gggccagctc tgcctgcagg tcactagtgc catgacagtt aaagtgttca tacagacaca
3781 tagttcattg taattactga tttagcgttg tcttggcagt tttcagtttg catgcattta
3841 tttatttatt tatttattta tttatttatt taatgcatgg aagtacactg ttgctgtact
3901 gatggttgtt tgcctttgtg tggttgttgg gaattgaatt ttttttttta ggacctctct
3961 ttgctctggt cgaccctgct cactccggtc aactcctatg ggtcaactct gctcattcag
4021 tccctgcttg ttctggccca aagatttatt tattatttat tatacataaa tacactgtag
4081 ctgacttcag atgcaccaga agagggcgtc agatctcatt acagatggtt gtgagccacc
4141 atgtggttgc tggagtttga actcaggacc ttcaaaagag cagtcagtgc tcttaccctc
4201 tgagccatct ccccagtcct cagtttgtct tcttaattgt gcgatttctt gaatcttcca
4261 aacagatccc ccaaagacac atgtgaccca tcaccccata tcttatgatg ctgtcaccct
4321 gaggtgctgg gccctgggct tctaccctgt tgacatcacc ctgacttggc agttgaatgg
4381 ggaggagctg acccaggaca cggagcttgt ggagaccagg cctgcagggg atggaacctt
4441 ccagaagtgg gcagctgtga tggtgccttt tggggaggag cagaattaca catgccatgt
4501 gcaccatgag gggctgcctg agcccctcac cctgagatgg ggtaaggagg gtgtgggtgc
4561 agagctgtgg tcagggaaag ctggagcatt ctgcagactc tgagctggtc agggctgaga
4621 gctgggatca tgaccctcac cttcatttcc tgtacctgtc cttcccagag cctcctccat
4681 acactgtctc caacatggcg accattgcta ttgtggttga ccttggagct gtggccatca
4741 ttggagctgt ggtggctttt gtgatgaata ggaggtgaaa cacaggtagg aaagggcagg
4801 gtctgagttc tctctcagtc tcctttagaa gtgtgctcta atcattaatg ggaaacccat
4861 ctacacccca cattgctacc ttctccaact gggtcctctg tcagttctgg gaacttccaa
4921 gatcttcctt gaactctcac agctttcctt ctcacaggtg gacaaggagg ggactgtgct
4981 ccagctccag gttagtgtgg ggacaggatt gtcctgtgga cattgcagtg aagctggaga
5041 tgttggggag ctctgggaac ccatagtaac tcttccagag aaatcttcca gggccgcagt
5101 tgtccaatat gaatacatat atgtacatat gcatatacat tttttaccct tggcagggac
5161 agctcctaga gctctgatag atctctccca ggtggtaaag gtgacactct gggacctgat
5221 tggggagggg caatgtggat atgattgggt ttcagggact ccacgaatcc cctctgagtg
5281 agtggtgggt tgttggaatg ttgtcttcac agtgatgggt cgtgtccctc attctctagc
5341 atgaagacag ctgcctggac tgcactgagt gacagacgat gtgttcatgt ctctctcctg
5401 tgacatccag agccctcagt tctctttaga caacagtgtc tcatgttccc tgtgagccta
5461 tggactcaat gtgaggaact gtggagccca gcctgccctg cacacctgga ccctgtccct
5521 gcactgccct gtgttccctt ccacagccaa ccttcctgct ccagccaaac actgggtaca
5581 tctacatcct gtcagctcca tgctgccccg agttccagct ccatacttcc acacgaagag
5641 tatgtgacct tgattgttat catcttgagc tgagggttga ttgcttgtta atttaatggt
5701 tgagaatact tagcattttt ctcttttttt taaaaaaaaa taaatggcag atggaaaacc
5761 tttcaggatc tgtgtcactg agcattgtgt atctgttggg agagcttgag gctatgagag
5821 ctgagtgtga acaggactgt gcacaggtgg tctcagtcat ttattttctt taatgggttc
5881 actgtgtaac atccgggctc tactctctcc atcactatga agcacatacc gagagtctgt
5941 gatctcaagg acacagtgaa ggcctgagcc ttgtcctgtc cccaggatta tgagccccca
6001 agggctaaag atcagaactc atctggggat cctttaaagt gctgtgtgca caagataggt
6061 catgtcacat ttccttccat ccacttgat
//