GenBank-Updates@genbank.bio.net (05/30/91)
LOCUS PLYBKGPS 725 bp ds-DNA VRL 30-MAY-1991
DEFINITION Human polyomavirus BK genome, partial sequence.
ACCESSION D00678
KEYWORDS agnoprotein; capsid protein VP2; large T-/small t-antigen;
origin of replication.
SOURCE Polyomavirus BK (cell line BKT-1B; strain Gardner) DNA, isolated
from human urine, propagated in hamster fibrosarcoma.
ORGANISM Polyomavirus BK
Viridae; ds-DNA nonenveloped viruses; Papovaviridae;
Polyomaviruses.
REFERENCE 1 (bases 1 to 725)
AUTHORS Moens,U., Sundsfjord,A., Flegstad,T. and Traavik,T.
TITLE BK virus early RNA transcripts in stably transformed cells :
enhanced levels induced by dibutyryl cAMP, forskolin and
12-0-tetradecanoylphorbol-1 3-acetate treatment
JOURNAL J. Gen. Virol. 71, 1461-1471 (1990)
STANDARD full staff_entry
COMMENT These data kindly submitted in computer readable form by:
Ugo Moens
Institute of Medical Biology
University of Tromso
P.O. Box 977
University of Tromso
N-9001, Tromso
Norway
Phone: (+) 47 83 44718
Email: Terje.Johansen@esuit.uit.no
Fax: (+) 47 83 80850
FEATURES Location/Qualifiers
CDS complement(<1..48)
/note="large T-/small t- antigen"
misc_signal 49..445
/note="regulatory region"
rep_origin 145..167
/note="origin of replication"
misc_signal 191..258
/note="P block"
misc_signal 259..297
/note="Q block"
misc_signal 298..314
/note="R block"
misc_signal 315..318
/note="P block"
misc_signal 319..342
/note="Q block"
misc_signal 343..390
/note="R block"
CDS 456..656
/note="agnoprotein"
CDS 692..>725
/note="capsid protein VP2"
BASE COUNT 221 a 152 c 177 g 175 t
ORIGIN
1 aaggtccatg agctccatgg attcttccct gttaagcact ttatccattt ttgcaaaaat
61 tgcaaaagaa tagggatttc cccaaatagt tttgctaggc ctcagaaaaa gcctccacac
121 ccttactact tgagagaaag ggtggaggca gaggcggcct cggcctctta tatattataa
181 aaaaaaaggc cacagggagg agctgcttac ccatggaatg cagccaaacc atgacctcag
241 gaaggaaagt gcatgactgg gcagccagcc agtggcagtt aatagtgaaa ccccgcccct
301 aaaattccaa ggtgactggg cagccagcca gtggcagtta ataataaaca caagaggaag
361 tggaaactgg ccaaaggagt ggaaagcagc cagacagaca tgttttgcga gcctaggaat
421 cttggccttg tccccagtta aactggacaa aggccatggt tctgcgccag ctgtcacgac
481 aagcttcagt gaaagttggt aaaacctgga ctggaacaaa aaaaagagct cagaggattt
541 ttatttttat tttagagctt ttgctggaat tttgtagagg tgaagacagt gtagacggga
601 aaaacaaaag taccactgct ttacctgctg taaaagactc tgtaaaagac tcctaggtaa
661 gtaatccctt tttttttgta tttccaggtt catgggtgct gctctagcac ttttggggga
721 cctag
//