[bionet.software] ftp sites, re: DOS software

gribskov@FCRFV1.NCIFCRF.GOV ("Gribskov, Michael") (03/07/91)

This is an updated version of the list I previously posted to bionews.  
I did not cross post it to bio-software because I thought there would be
a heavy overlap.  However, in response to the recent questions about 
DOS software, here is the most recent version.  In  addition to sites 
mentioned in other postings, I note that there is one other listing that 
meentions DOS, the NIC.FUNET site in Finland.  I hope this is helpful.
*     *     *     *     *     *     *     *     *     *     *     *     *     *

*     *     *     *     *     *     *     *     *     *     *     *     *     *
                     Molecular Biology FTP and Server List
                                 7 March 1991

                                Michael Gribskov
                              gribskov@ncifcrf.gov

           IF YOU REDISTRIBUTE THIS LIST, PLEASE PRESERVE THIS HEADER
-------------------------------------------------------------------------------
The address for each site is shown in the left column, with the numerical
intenet address below, if it was available.  This is followed by the mail
address of the responsible person, or an address for more information.  For
FTP sites, the directory containing the relevent material is shown in
parentheses if it is other than the default directory.  Note that the larger
FTP sites may have a great deal of material of general interest in addition 
to what is shown here. 

For bulletin boards, the subscription address is shown in the left 
column, and the address for actual message in parentheses in the center 
column.  

++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
		Software packages, databases, and smaller FTP sites
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
address						contents		
responsible person/more information
+-----------------------------------------------------------------------------
evolution.genetics.washington.edu 	PHYLIP phylogeny package v3.3
128.95.12.41

Joe Felsenstein*, joe@genetics.washington.edu
+-----------------------------------------------------------------------------
anthro.utah.edu.			PHYLIP phylogeny package v3.3
128.110.192.93				(officially sanctioned by author)

Alan Rogers, rogers@anthro.utah.edu
+------------------------------------------------------------------------------
frodo.mgh.harvard.edu			Codon usage tables for all major species
132.183.190.10	
( [.codon] )

Mike Cherry*, cherry@frodo.mgh.harvard.edu
+------------------------------------------------------------------------------
haywire.nmsu.edu			gm (gene modeler) package	
128.123.001.032

Chris Fields*, cfields@nmsu.edu
+------------------------------------------------------------------------------
lhc.nlm.nih.gov				AIMB (AI and mol.bio. 
130.14.1.128                                  researchers database)
(/pub/aimb-db)

Lawrence Hunter*, hunter@nlm.nih.gov
-------------------------------------------------------------------------------
mcclb0.med.nyu.edu			USENET genbank software			

Ross Smith, smith@mcclb0.med.nyu.edu
+------------------------------------------------------------------------------
ncifcrf.gov       			Delila sequence analysis system 
129.43.1.11				(150 programs)		
(/pub/delila)

Tom Schneider*, toms@ncifcrf.gov
+------------------------------------------------------------------------------
uvaarpa.virginia.edu  			FASTA database search			
(/public_access/fasta.shar) 		program

William Pearson*, wrp@virginia.edu
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
		Larger FTP sites
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
embl-heidelberg.de 			EMBL server
192.54.41.20                            EMBL (updated daily)
					SWISS-PROT (and updates), PDB
					DROMAP, ECD, ENZYME, EPD, LiMB, NGDD,
Rainer Fuchs				PROSITE, SEQANALREF, TFD. 
fuchs@embl.bitnet			PC, UNIX, Mac & VAX software
+------------------------------------------------------------------------------
flat.nig.ac.jp		
133.39.128.2				GenBank, EMBL, DDBJ, PIR, SWISS-PROT,
					GENPEPT, LiMB
	  				Software: FLAT DB search/retrieval 
						  program for UNIX
Sanzo Miyazawa
smiyazaw@flat.nig.ac.jp
+------------------------------------------------------------------------------
genbank.bio.net				Genbank server
134.172.1.160				Genbank db (quarterly)
(/Public)				Genbank updates (weekly & nightly)
					GENPEPT db & updates
					EMBL db & updates
                                        SWISS-PROT db (soon available)
                                        ALU, ENZYME, PROSITE, REBASE,
Dave Kristofferson, 			SEQANALREF. 
kristoff@genbank.bio.net 		software
consultant@genbank.bio.net     		On-line services
+------------------------------------------------------------------------------
iubio.bio.indiana.edu			IUBIO archive
129.79.1.101				Mac,VAX,Atari,DOS software
					DROMAP, EPD, LiMB, PROSITE, REBASE, 
Don Gilbert,                            TFD 
gilbertd@iubio.bio.indiana.edu		Phylip
					Authorin program
-------------------------------------------------------------------------------
mbcrr.harvard.edu			Molecular Biology Computer 		
134.174.51.4				Research Resource
					software
Temple Smith,				PLSEARCH pattern db 
tsmith@mbcrr.harvard.edu 		MASE 3.1 multiple sequence editor
+------------------------------------------------------------------------------
menudo.uh.edu				U Houston archive
129.7.1.6				Genbank sequence db
					PIR sequence db
Dan Davison, 				UNIX,DOS,VMS,Mac software
dbd@theory.bchs.uh.edu 			Cray software (future)
					BioMatrix archive
					Molecular evolution bb archive
+------------------------------------------------------------------------------
modl.unibas.ch				Biocomputing server
131.152.1.2				Biozentrum, Universitaet Basel
 
(/biology/EMBnet)			EMBL ( updated daily)
 
(/biology/databases)			ALU, DROMAP, ECD, ENZYME, EPD, LiMB,
                                        NGDD, PROSITE, REBASE, SEQANALREF,
			                TFD.
					GCG (3) format codon usage tables

Reinhard Doelz,				BIOSCI Journal tables of contents
doelz@urz.unibas.ch			Amos Bairoch*, bairoch@cgecmu51.bitnet
+------------------------------------------------------------------------------
ncbi.nlm.nih.gov			Natl. Center for Biotech. Information
130.14.20.1				NCBI software

					Geninfo db documentation		
Scott Federhen,
federhen@ncbi.nlm.nih.gov		(help and information)
 
(/repository)				ENZYME, EPD, LiMB, NGDD, PROSITE,
                                        REBASE, SEQANALREF, TFD
					metabolism, mol-model
 
(/toolbox)				assorted public domain software
(/pub)					more software - BLAST, FASTA, MACAW, etc
 
(/pub/aimb-db)				AIMB db
					Lawrence Hunter*, hunter@nlm.nih.gov
+------------------------------------------------------------------------------
nic.funet.fi                            Finnish State Supercomputer Center
128.214.6.100                           Center for Scientific Computing
(pub/sci/molbio)                        VAX, Unix, DOS, Mac software
                                        many non-biological applications
Rob Harper, harper@csc.fi
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
		Server sites
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
bioserve%genome@lanl.gov (2)		Los Alamos National Laboratory server
					Genbank documentation			
Michael Cinofsky,			software archive (future)
michael%domain@lanl.gov	
-------------------------------------------------------------------------------
fileserv@gunbrf.bitnet (2)		PIR server				
					PIR, NBRF Nucleic, Genbank, EMBL 

Dr. John S. Garavelli, garavell@gunbrf.bitnet		
Ms. Kathryn Sidman,   pirmail@gunbrf.bitnet
+------------------------------------------------------------------------------
gene-server@bchs.uh.edu (1)		U Houston gene server			
					Genbank sequence db
gene-server-management@bchs.uh.edu	PIR sequence db
					UNIX,DOS,VMS,Mac software
					Cray software (future)
					BioMatrix archive
					Molecular evolution bb archive
					FASTA searches
-------------------------------------------------------------------------------
listserv@irlearn.bitnet (2)		IRLEARN list server			
					BIOSCI newsgroups & archives

					Newsgroups:
					AGEING, AG-FORST, BIO-NAUT, BIONEWS, 
					BIO-JRNL, BIOMATRX, BIO-SOFT, CHROM-22, 
					EMBL-DB, BIOJOBS, GENBANKB, GENE-ORG, 
					ORG, GNOME-PR, METHODS, MOL-EVOL, 
					POP-BIO, PROTEINS, SCI-RES
Rob Harper, harper@csc.fi		(Newsgroup@irlearn.bitnet)		
					e.g. AGEING@irlearn.bitnet
+------------------------------------------------------------------------------
listserv@taunivm.bitnet	(2)		photosynthesis researchers bb		
                                        (photosyn@taunivm.bitnet)	
Jonathan Marder, marder@hujiagri.bitnet
+------------------------------------------------------------------------------
listserv@utoronto.bitnet (2)		U Toronto list server			

John Cargill 				GCG (3) software discussion group
cargill@utoroci.bitnet			(info-gcg@utoronto.bitnet)
cargill@galen.oci.utoronto.ca
+------------------------------------------------------------------------------
netserv@embl.bitnet (2)			EMBL server
					EMBL (updated daily)
					SWISS-PROT (and updates), PDB
					DROMAP, ECD, ENZYME, EPD, LiMB, NGDD,
					PROSITE, SEQANALREF, TFD. 
					PC, UNIX, Mac & VAX software
search@embl.bitnet (2)			FASTA searches
quick@embl.bitnet (2)			Quicksearch (4) searches
 
Rainer Fuchs, fuchs@embl.bitnet
+------------------------------------------------------------------------------
netserv@flat.nig.ac.jp	(2)		FLAT DB E-Mail Network Server

					DDBJ,Genbank,EMBL (updated 2x daily)
					GENPEPT, SWISS-PROT, PIR, PRF
Sanzo Miyazawa		 		keyword searches by author, 
smiyazaw@flat.nig.ac.jp			journal, accession, and description
+------------------------------------------------------------------------------
pythia@cis.ucsc.edu  (2)		Alu sequence identification server

Aleksandar Milosavljevic
pythia-admin@cis.ucsc.edu 
milosav@cis.ucsc.edu
+------------------------------------------------------------------------------
					Genbank	server				
search@genbank.bio.net (2)		FASTA searches	
retrieve@genbank.bio.net		Sequence retrieval			

genbank@genbank.bio.net
consultant@genbank.bio.net		(help with FASTA)
retrieve-request@genbank.bio.net	(help with retrieval)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
	Anticipated availability: fall of 1991.
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Kenneth Kidd, Martin Mador 		Biology Software Info. Clearinghouse
genmlm@yalevm.bitnet			Online software database
					peer reviews
					software archive
					bug reports
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
* indicates that the contact person is the author of the database or program
(1) for information on this server send the message "help" in subject
(2) for information on this server send the message "help" as the first line of 
    the message
(3) Genetics Computer Group Sequence Analysis Package
(4) The GCG (3) program quicksearch with enhancements added at EMBL is
    used to check if a new sequence has been previously sequenced. The
    search is much faster than FASTA, but is will only find nearly identical
    sequences. 

db = database
bb = bulletin board (or discussion group)


Sequence data banks

DDBJ        DNA Data Bank of Japan db
EMBL	    European Molecular Biology Laboratory DNA sequence db
GENBANK     GenBank nucleic acid db
GENPEPT     GenBank translated protein db
PIR	    Protein Information Resource (NBRF protein sequence db)
SWISS-PROT  SWISS-PROT protein sequence db

Other data banks 

AIMB        AI and molecular biology researchers db (Hunter, NLM)
ALU         Alu Sequence db (Jurka)
DROMAP      Drosophila Genetic Maps db (M. Ashburner, Cambridge)
ECD	    Escherichia coli db (M. Kroeger, Giessen)
ENZYME      Enzymes nomenclature db (A. Bairoch, Geneva)
EPD         Eukaryotic Promoter db (P. Bucher, Stanford)
LiMB        Listing of Molecular Biology databases (C. Burks, Los Alamos)
NGDD        Normalized gene maps for E.coli, S.typh., etc. (Y. Abel, Montreal)
PDB         Protein Data Bank (3D structures) (E. Abola, Brookhaven)
PROSITE     Dictionary of Protein Sites and Patterns (A. Bairoch, Geneva)
PRF	    Protein Research Foundation db
REBASE      Type 2 Restriction Enzymes db (R. Roberts, CSH)
SEQANALREF  Sequence analysis reference list (Bairoch, Geneva)
TFD         Transcription Factors Relational db (D. Ghosh, NCBI)

gribskov@FCRFV1.NCIFCRF.GOV ("Gribskov, Michael") (03/08/91)

This is an updated version of the list I previously posted to bionews.  
I did not cross post it to bio-software because I thought there would be
a heavy overlap.  However, in response to the recent questions about 
DOS software, here is the most recent version.  In  addition to sites 
mentioned in other postings, I note that there is one other listing that 
meentions DOS, the NIC.FUNET site in Finland.  I hope this is helpful.
*     *     *     *     *     *     *     *     *     *     *     *     *     *

*     *     *     *     *     *     *     *     *     *     *     *     *     *
                     Molecular Biology FTP and Server List
                                 7 March 1991

                                Michael Gribskov
                              gribskov@ncifcrf.gov

           IF YOU REDISTRIBUTE THIS LIST, PLEASE PRESERVE THIS HEADER
-------------------------------------------------------------------------------
The address for each site is shown in the left column, with the numerical
intenet address below, if it was available.  This is followed by the mail
address of the responsible person, or an address for more information.  For
FTP sites, the directory containing the relevent material is shown in
parentheses if it is other than the default directory.  Note that the larger
FTP sites may have a great deal of material of general interest in addition 
to what is shown here. 

For bulletin boards, the subscription address is shown in the left 
column, and the address for actual message in parentheses in the center 
column.  

++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
		Software packages, databases, and smaller FTP sites
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
address						contents		
responsible person/more information
+-----------------------------------------------------------------------------
evolution.genetics.washington.edu 	PHYLIP phylogeny package v3.3
128.95.12.41

Joe Felsenstein*, joe@genetics.washington.edu
+-----------------------------------------------------------------------------
anthro.utah.edu.			PHYLIP phylogeny package v3.3
128.110.192.93				(officially sanctioned by author)

Alan Rogers, rogers@anthro.utah.edu
+------------------------------------------------------------------------------
frodo.mgh.harvard.edu			Codon usage tables for all major species
132.183.190.10				(GCG format)
( [.codon] )

Mike Cherry*, cherry@frodo.mgh.harvard.edu
+------------------------------------------------------------------------------
haywire.nmsu.edu			gm (gene modeler) package	
128.123.001.032

Chris Fields*, cfields@nmsu.edu
+------------------------------------------------------------------------------
lhc.nlm.nih.gov				AIMB (AI and mol.bio. 
130.14.1.128                                  researchers database)
(/pub/aimb-db)

Lawrence Hunter*, hunter@nlm.nih.gov
-------------------------------------------------------------------------------
mcclb0.med.nyu.edu			USENET genbank software			

Ross Smith, smith@mcclb0.med.nyu.edu
+------------------------------------------------------------------------------
ncifcrf.gov       			Delila sequence analysis system 
129.43.1.11				(150 programs)		
(/pub/delila)

Tom Schneider*, toms@ncifcrf.gov
+------------------------------------------------------------------------------
uvaarpa.virginia.edu  			FASTA database search			
(/public_access/fasta.shar) 		program

William Pearson*, wrp@virginia.edu
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
		Larger FTP sites
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
embl-heidelberg.de 			EMBL server
192.54.41.20                            EMBL (updated daily)
					SWISS-PROT (and updates), PDB
					DROMAP, ECD, ENZYME, EPD, LiMB, NGDD,
Rainer Fuchs				PROSITE, SEQANALREF, TFD. 
fuchs@embl.bitnet			PC, UNIX, Mac & VAX software
+------------------------------------------------------------------------------
flat.nig.ac.jp		
133.39.128.2				GenBank, EMBL, DDBJ, PIR, SWISS-PROT,
					GENPEPT, LiMB
	  				Software: FLAT DB search/retrieval 
						  program for UNIX
Sanzo Miyazawa
smiyazaw@flat.nig.ac.jp
+------------------------------------------------------------------------------
genbank.bio.net				Genbank server
134.172.1.160				Genbank db (quarterly)
(/Public)				Genbank updates (weekly & nightly)
					GENPEPT db & updates
					EMBL db & updates
                                        SWISS-PROT db (soon available)
                                        ALU, ENZYME, PROSITE, REBASE,
Dave Kristofferson, 			SEQANALREF. 
kristoff@genbank.bio.net 		software
consultant@genbank.bio.net     		On-line services
+------------------------------------------------------------------------------
iubio.bio.indiana.edu			IUBIO archive
129.79.1.101				Mac,VAX,Atari,DOS software
					DROMAP, EPD, LiMB, PROSITE, REBASE, 
Don Gilbert,                            TFD 
gilbertd@iubio.bio.indiana.edu		Phylip
					Authorin program
-------------------------------------------------------------------------------
mbcrr.harvard.edu			Molecular Biology Computer 		
134.174.51.4				Research Resource
					software
Temple Smith,				PLSEARCH pattern db 
tsmith@mbcrr.harvard.edu 		MASE 3.1 multiple sequence editor
+------------------------------------------------------------------------------
menudo.uh.edu				U Houston archive
129.7.1.6				Genbank sequence db
					PIR sequence db
Dan Davison, 				UNIX,DOS,VMS,Mac software
dbd@theory.bchs.uh.edu 			Cray software (future)
					BioMatrix archive
					Molecular evolution bb archive
+------------------------------------------------------------------------------
modl.unibas.ch				Biocomputing server
131.152.1.2				Biozentrum, Universitaet Basel
 
(/biology/EMBnet)			EMBL ( updated daily)
 
(/biology/databases)			ALU, DROMAP, ECD, ENZYME, EPD, LiMB,
                                        NGDD, PROSITE, REBASE, SEQANALREF,
			                TFD.
					GCG (3) format codon usage tables

Reinhard Doelz,				BIOSCI Journal tables of contents
doelz@urz.unibas.ch			Amos Bairoch*, bairoch@cgecmu51.bitnet
+------------------------------------------------------------------------------
ncbi.nlm.nih.gov			Natl. Center for Biotech. Information
130.14.20.1				NCBI software

					Geninfo db documentation		
Scott Federhen,
federhen@ncbi.nlm.nih.gov		(help and information)
 
(/repository)				ENZYME, EPD, LiMB, NGDD, PROSITE,
                                        REBASE, SEQANALREF, SWISS-PROT, TFD
					metabolism, mol-model
 
(/toolbox)				assorted public domain software
(/pub)					more software - BLAST, FASTA, MACAW, etc
 
(/pub/aimb-db)				AIMB db
					Lawrence Hunter*, hunter@nlm.nih.gov
+------------------------------------------------------------------------------
nic.funet.fi                            Finnish State Supercomputer Center
128.214.6.100                           Center for Scientific Computing
(pub/sci/molbio)                        VAX, Unix, DOS, Mac software
                                        many non-biological applications
Rob Harper, harper@csc.fi
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
		Server sites
+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
bioserve%genome@lanl.gov (2)		Los Alamos National Laboratory server
					Genbank documentation			
Michael Cinofsky,			software archive (future)
michael%domain@lanl.gov	
-------------------------------------------------------------------------------
fileserv@gunbrf.bitnet (2)		PIR server				
					PIR, NBRF Nucleic, Genbank, EMBL 

Dr. John S. Garavelli, garavell@gunbrf.bitnet		
Ms. Kathryn Sidman,   pirmail@gunbrf.bitnet
+------------------------------------------------------------------------------
gene-server@bchs.uh.edu (1)		U Houston gene server			
					Genbank sequence db
gene-server-management@bchs.uh.edu	PIR sequence db
					UNIX,DOS,VMS,Mac software
					Cray software (future)
					BioMatrix archive
					Molecular evolution bb archive
					FASTA searches
-------------------------------------------------------------------------------
listserv@irlearn.bitnet (2)		IRLEARN list server			
					BIOSCI newsgroups & archives

					Newsgroups:
					AGEING, AG-FORST, BIO-NAUT, BIONEWS, 
					BIO-JRNL, BIOMATRX, BIO-SOFT, CHROM-22, 
					EMBL-DB, BIOJOBS, GENBANKB, GENE-ORG, 
					ORG, GNOME-PR, METHODS, MOL-EVOL, 
					POP-BIO, PROTEINS, SCI-RES
Rob Harper, harper@csc.fi		(Newsgroup@irlearn.bitnet)		
					e.g. AGEING@irlearn.bitnet
+------------------------------------------------------------------------------
listserv@taunivm.bitnet	(2)		photosynthesis researchers bb		
                                        (photosyn@taunivm.bitnet)	
Jonathan Marder, marder@hujiagri.bitnet
+------------------------------------------------------------------------------
listserv@utoronto.bitnet (2)		U Toronto list server			

John Cargill 				GCG (3) software discussion group
cargill@utoroci.bitnet			(info-gcg@utoronto.bitnet)
cargill@galen.oci.utoronto.ca
+------------------------------------------------------------------------------
netserv@embl.bitnet (2)			EMBL server
					EMBL (updated daily)
					SWISS-PROT (and updates), PDB
					DROMAP, ECD, ENZYME, EPD, LiMB, NGDD,
					PROSITE, SEQANALREF, TFD. 
					PC, UNIX, Mac & VAX software
search@embl.bitnet (2)			FASTA searches
quick@embl.bitnet (2)			Quicksearch (4) searches
 
Rainer Fuchs, fuchs@embl.bitnet
+------------------------------------------------------------------------------
netserv@flat.nig.ac.jp	(2)		FLAT DB E-Mail Network Server

					DDBJ,Genbank,EMBL (updated 2x daily)
					GENPEPT, SWISS-PROT, PIR, PRF
Sanzo Miyazawa		 		keyword searches by author, 
smiyazaw@flat.nig.ac.jp			journal, accession, and description
+------------------------------------------------------------------------------
pythia@cis.ucsc.edu  (2)		Alu sequence identification server

Aleksandar Milosavljevic
pythia-admin@cis.ucsc.edu 
milosav@cis.ucsc.edu
+------------------------------------------------------------------------------
					Genbank	server				
search@genbank.bio.net (2)		FASTA searches	
retrieve@genbank.bio.net		Sequence retrieval			

genbank@genbank.bio.net
consultant@genbank.bio.net		(help with FASTA)
retrieve-request@genbank.bio.net	(help with retrieval)
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
	Anticipated availability: fall of 1991.
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Kenneth Kidd, Martin Mador 		Biology Software Info. Clearinghouse
genmlm@yalevm.bitnet			Online software database
					peer reviews
					software archive
					bug reports
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
* indicates that the contact person is the author of the database or program
(1) for information on this server send the message "help" in subject
(2) for information on this server send the message "help" as the first line of 
    the message
(3) Genetics Computer Group Sequence Analysis Package
(4) The GCG (3) program quicksearch with enhancements added at EMBL is
    used to check if a new sequence has been previously sequenced. The
    search is much faster than FASTA, but is will only find nearly identical
    sequences. 

db = database
bb = bulletin board (or discussion group)


Sequence data banks

DDBJ        DNA Data Bank of Japan db
EMBL	    European Molecular Biology Laboratory DNA sequence db
GENBANK     GenBank nucleic acid db
GENPEPT     GenBank translated protein db
PIR	    Protein Information Resource (NBRF protein sequence db)
SWISS-PROT  SWISS-PROT protein sequence db

Other data banks 

AIMB        AI and molecular biology researchers db (Hunter, NLM)
ALU         Alu Sequence db (Jurka)
DROMAP      Drosophila Genetic Maps db (M. Ashburner, Cambridge)
ECD	    Escherichia coli db (M. Kroeger, Giessen)
ENZYME      Enzymes nomenclature db (A. Bairoch, Geneva)
EPD         Eukaryotic Promoter db (P. Bucher, Stanford)
LiMB        Listing of Molecular Biology databases (C. Burks, Los Alamos)
NGDD        Normalized gene maps for E.coli, S.typh., etc. (Y. Abel, Montreal)
PDB         Protein Data Bank (3D structures) (E. Abola, Brookhaven)
PROSITE     Dictionary of Protein Sites and Patterns (A. Bairoch, Geneva)
PRF	    Protein Research Foundation db
REBASE      Type 2 Restriction Enzymes db (R. Roberts, CSH)
SEQANALREF  Sequence analysis reference list (Bairoch, Geneva)
TFD         Transcription Factors Relational db (D. Ghosh, NCBI)