[sci.nanotech] Diamonds?

toms@fcs260c2.ncifcrf.gov (Tom Schneider) (04/04/91)

I was reading one of Drexler's papers in the Nanocon 1989 proceedings, where he
notes the possibility of creating diamond for structural components.  So I
began to think of a shark with diamond tipped teeth.  Wouldn't that have an
advantage over calcium?  Wouldn't a diatom or shrimp encased in diamond be able
to survive better?  So why don't living things use diamond?  Or do they?  If
they don't, is this telling us something about the limits of nanotechnology?
That is, maybe diamond can ONLY be made at high pressures and/or temperatures,
so a molecular machine couldn't do it, unless the machine operated under those
conditions.

It's clearly possible for cells to deal with crystals.  We know of bacteria
that make magnets, that trigger ice formation (!) and lots of other cases of
mineral deposition, such as bone formation:

@article{Mann1988,
author = "S. Mann",
title = "Molecular recognition in biomineralization",
journal = "Nature",
volume = "332",
pages = "119-124",
year = "1988"}

Cells handle carbon structures all the time, so why are shells and structural
components mostly silicon and calcuim?  The person who figures out how to get
a cell to grow a diamond may become rich!

  Tom Schneider
  National Cancer Institute
  Laboratory of Mathematical Biology
  Frederick, Maryland  21702-1201
  toms@ncifcrf.gov

[I don't know about sharks' teeth, but human teeth are continually 
 redeposited from minerals in the saliva, in a process involving no
 molecular machinery at all.  Maybe this puts limits on the materials
 that can work.  
 More fundamentally, there are some limits to the capabilities of
 biomechanisms as they work inside cells.  In particular, a design
 that calls for a specific reaction to happen at one place and not
 another is much more complicated than with a nanomechanism that 
 works like a "pick and place" robot arm.  The mechanisms that 
 the cell has to use look a lot more like those of synthetic 
 chemistry, and the assembly of a complex design can become
 exponential in the worst case.  (Although I don't think this 
 applies to diamond per se).
 --JoSH]

john@granada.mit.edu (John Olson) (04/05/91)

Diamonds have a big disadvantage over bone in that diamonds are
thermodynamically unstable.  At all temperatures, graphite is the more
stable state for carbon.  If you heat up a diamond--even under pressure--
it will mostly revert to graphite.  the only reason they last is that the
diamond --> graphite reaction is very slow at normal temperatures.
And the only reason we see diamond at all is that there is an equilibrium
between graphite and diamond.  So when you do the Superman synthesis
(coal  -->  diamonds under high pressure and temperature), most of
the graphite just stays graphite.

Now, that's not to say that a nanomachine (or a cell) couldn't make diamond,
but it will be more difficult to synthesize than materials which can be
thermodynamically stable.  When a diatom makes its shell out of silica,
well, silica will precipitate into a solid without the diatom's help.  The diatom
just has to make a frame for the silica to sit on.  Similarly (as JoSH pointed
out) for teeth and bones, the minerals will precipitate out on their own.

erich@eecs.cs.pdx.edu (Erich Stefan Boleyn) (04/05/91)

toms@fcs260c2.ncifcrf.gov (Tom Schneider) writes:


>                 ...So why don't living things use diamond?  Or do they?  If
>they don't, is this telling us something about the limits of nanotechnology?
>That is, maybe diamond can ONLY be made at high pressures and/or temperatures,
>so a molecular machine couldn't do it, unless the machine operated under those
>conditions.

   Not necessarily.  Consider how diamond is produced...  the intense
temperatures and pressures are necessary because there is inherently a large
energy input required to produce diamond.  If you look at the chemical
reaction, the activation energy is large, but there is no product energy,
and since the energy required is so large, it is very slow.

>It's clearly possible for cells to deal with crystals.  We know of bacteria
>that make magnets, that trigger ice formation (!) and lots of other cases of
>mineral deposition, such as bone formation:

   Crystals are somewhat easy to produce...  so biologically, most of what
is done is making the production easier...  usually by making the materials
easily accessible, maybe even catalyzing the reaction.

>Cells handle carbon structures all the time, so why are shells and structural
>components mostly silicon and calcuim?  The person who figures out how to get
>a cell to grow a diamond may become rich!

   The energy required to do this as opposed to making crytals that have a
small associated energy would be enormous.  Imagine all of the food required
to power those cells!

   Normally, organisms evolve into routes where the energy expenditure to
try out a new idea is sufficiently small so that it is "worth" attempting.
The bio-engineering necessary to make this thing work would be quite an
achievement...  worthy of some of the better science-fiction written.

   Erich

             "I haven't lost my mind; I know exactly where it is."
     / --  Erich Stefan Boleyn  -- \       --=> *Mad Genius wanna-be* <=--
    { Honorary Grad. Student (Math) }--> Internet E-mail: <erich@cs.pdx.edu>
     \  Portland State University  /        Phone #:  (503) 289-4635

minsky@media-lab.media.mit.edu (Marvin Minsky) (04/09/91)

In article <Apr.4.22.02.48.1991.29630@athos.rutgers.edu> john@granada.mit.edu (John Olson) writes:
>
>Now, that's not to say that a nanomachine (or a cell) couldn't make diamond,
>but it will be more difficult to synthesize than materials which can be
>thermodynamically stable.

There have been a number of such remarks.  But it is not obvious that
diamonds need by significantly harder to Nanofacture (is that a new
word) than more stable substances.  Because once you have positioned
the carbon in the right place, etc., you might be able to zap it wigh
an electric pulse much larger than is ever possible chemically --
while perhaps holding it under unusual mechanical pressure.

Perhaps one point of nanotechnology has been overlooked: that when you
do things one atom at a time, you're not at the mercy of the standard
chemical constraints that come from thermodynamic statistics.  

Maybe there are even substances stronger than diamond that cannot
occur in nature because the formation statistics are too unfavorable
-- and yet are metastable enough, like diamond, to last a few billion
years once formed.

dietz@cs.rochester.edu (Paul Dietz) (04/09/91)

 erich@eecs.cs.pdx.edu (Erich Stefan Boleyn) writes:

>>                 ...So why don't living things use diamond?  Or do they?  If
>>they don't, is this telling us something about the limits of nanotechnology?
>>That is, maybe diamond can ONLY be made at high pressures and/or temperatures,
>>so a molecular machine couldn't do it, unless the machine operated under those
>>conditions.
>
>   Not necessarily.  Consider how diamond is produced...  the intense
>temperatures and pressures are necessary because there is inherently a large
>energy input required to produce diamond.  If you look at the chemical
>reaction, the activation energy is large, but there is no product energy,
>and since the energy required is so large, it is very slow.


Uh, fellows... you guys *are* aware of the work over the last few
years on chemical vapor deposition of diamonds, aren't you?  Carbon
deposited from a near vacuum in the presence of large amounts of
atomic hydrogen preferentially forms diamond.  The first work (in
Russia and Japan) used things like microwave discharges, but they can
now make it work using just an acetylene torch flame as the source.
This technology is already making its way into commercial products.

High pressure is *not* required to make diamond.  A source of
chemical energy (in this case, atomic carbon and hydrogen) is
needed, but that's also true in biological systems, where
energy-rich compounds are consumed so that ordered structures
(proteins, DNA) can be assembled with low error.

Anyway, saying that diamond does not occur in biology because graphite
is the lower energy state begs the question: why doesn't *graphite*
occur?  Or Kevlar, or nylon, or ultrahigh molecular weight
polyethylene, or some other high strength materials?  Most likely
because evolution is constrained to do local search, and has looked at
only a very tiny region of the search space.  Preexisting solutions
get adapted: proteins used to make spider webs, for example, even
though other materials would be stronger.

	Paul F. Dietz
	dietz@cs.rochester.edu

merkle@parc.xerox.com (Ralph Merkle) (04/09/91)

Diamond was recently named "molecule of the year" by Science
(volume 250, December 21 1990).  On page 1641 it says:

"Vapor deposition methodology now appears to be in an exponential
phase of growth.  Diamond films can be grown at pressures
ranging from tens of torrs to 1 atmosphere.  Film growth rates
of 1 millimeter per hour are possible.  Diverse volatilization
methods have become available, including microwave discharges,
hot filaments, plasma torches, and ion beams.  The deposition
of films at lower-than-normal temperatures (around 300 degrees C
instead of the standard 700 to 1100 degrees C) has been accomplished
through the addition of halogens to reaction mixtures;  this is
an important step if diamond is to be deposited on temperature-
sensitive substrates.  All of these variations on the basic CVD
[chemical vapor deposition] theme are making possible faster
production of better materials with diverse morphologies."

In another section, the article states that "...one estimate is
that diamond chips might be able to withstand temperatures as high
as 5000 degrees C."

Clearly, diamond can be synthesized at room temperature and at
low pressure.  The argument that diamond is "thermodynamically
unstable" is irrelevant if the time required for it to adopt
a "stable" form exceeds the life of the universe.  Many things
are "thermodynamically unstable" but last quite a long time
and are quite useful.  "Diamonds are forever" is perhaps an
exaggeration, but does indicate that the useful lifetime of
diamond structures, provided that you refrain from putting them
in a furnace, should be quite long.

cphoenix@elaine25.stanford.edu (Chris Phoenix) (04/09/91)

In article <Apr.4.22.04.48.1991.29658@athos.rutgers.edu> erich@eecs.cs.pdx.edu (Erich Stefan Boleyn) writes:
>   Not necessarily.  Consider how diamond is produced...  the intense
>temperatures and pressures are necessary because there is inherently a large
>energy input required to produce diamond.  If you look at the chemical
>reaction, the activation energy is large, but there is no product energy,
>and since the energy required is so large, it is very slow.

Diamond does not require large temperatures or pressures.  See
Discover, March 91 (V. 12 #3) p. 66, "Diamonds in the Rough" by Ed
Regis.  John Angus has caused seed crystals to grow larger and
incorporate boron by passing methane gas heated to 1800 degrees over
them.  With boron in the gas, the diamonds turned blue.  He has also
replicated Yoichi Hirosi's work, making diamonds by using an
oxyacetylene welder's torch, aimed at a molybdenum disc on a
water-cooled copper block.  The diamonds form without seed crystals.

neufeld@aurora.physics.utoronto.ca (Christopher Neufeld) (04/09/91)

In article <Apr.4.22.02.48.1991.29630@athos.rutgers.edu> john@granada.mit.edu (John Olson) writes:
>Diamonds have a big disadvantage over bone in that diamonds are
>thermodynamically unstable.  At all temperatures, graphite is the more
>stable state for carbon.  If you heat up a diamond--even under pressure--
>it will mostly revert to graphite.  the only reason they last is that the
>diamond --> graphite reaction is very slow at normal temperatures.
>And the only reason we see diamond at all is that there is an equilibrium
>between graphite and diamond.  So when you do the Superman synthesis
>(coal  -->  diamonds under high pressure and temperature), most of
>the graphite just stays graphite.
>
   Huh? The energy required to make diamond from graphite is really
quite modest. To provide a scale, when a gram of graphite burns it
releases 7796.6 calories of heat. To change a gram of graphite into
diamonds requires all of 27.4 calories of heat. There's little
difference in energy between the two phases. The fact that diamond is a
higher energy phase, though, means that it is not thermodynamically
stable unless you can get some additional energy advantage from the
phase change. This happens if the P*dV contribution arising from the
lower volume of the diamond phase equals or exceeds the energy
difference in the crystal. The reason you have to go to such extreme
lengths to make diamond is that it doesn't matter how much energy you
inject into graphite, it's not going to change to diamond until diamond
is the stable allotrope.
   Looking at a phase diagram of carbon, one can see that around 13500
atmospheres diamond is the preferred phase at absolute zero. At
increasing temperatures the diamond/graphite transition region rises in
pressure, reaching 70000 atmospheres around 1400 Celcius, and at about
215000 atmospheres and 3900 Celcius the graphite/diamond transition
curve hits the solid/liquid transition line, which is pretty close to
vertical (constant temperature) all the way down to the triple point at
about 130 atmospheres. Note that this means that the ideal conditions
for forming diamond are high pressure and LOW temperature. The hotter
you make it, the harder you have to squeeze it to make diamond the
stable allotrope.
   To quote from _Carbon and Graphite Handbook_, and converting from a
rather quaint set of units of dubious historical interest:
     "Conversely, diamond exists quite well in the graphite-stable
      region at temperatures below [1230-1730 Celcius]. However, when
      diamond is heated to temperatures above about [1730 Celcius] at
      low pressure, it rapidly changes to graphite, because the thermal
      agitation of the atoms becomes energetic enough to swing them
      loose from the diamond lattice. They regroup in the more stable
      graphite lattice form."   p.54

Reference: _Carbon and Graphite Handbook_ by C.L. Mantell. 1968
           SBN 470 567791

   Note that if you make any diamond at all, it is because diamond was
the stable allotrope in the conditions under which you made it. If you
have an efficient system which exposes all the graphite to the same
conditions for a reasonable period of time, you should have essentially
complete conversion to diamond.
   The point of all this is that diamond would make a pretty good bone
material. It isn't going to transform spontaneously into graphite inside
a person's legs. I don't think there is much in the way of biological
impediments to the evolution of diamond bones. When you ask why
creatures haven't evolved diamond bones you might as well ask why they
haven't evolved bulletproof skins, asbestos fur, or for that matter,
warp drive. It just wasn't in the evolutionary dice.

>Now, that's not to say that a nanomachine (or a cell) couldn't make diamond,
>but it will be more difficult to synthesize than materials which can be
>thermodynamically stable.
>
   Well, wood is thermodynamically unstable. The low energy
configuration even of wet wood is ash, water vapour, and carbon dioxide.


-- 
 Christopher Neufeld....Just a graduate student  | Flash: morning star seen
 neufeld@aurora.physics.utoronto.ca    Ad astra! | in evening! Baffled
 cneufeld@{pnet91,pro-cco}.cts.com               | astronomers: "could mean
 "Don't edit reality for the sake of simplicity" | second coming of Elvis!"

erich@eecs.cs.pdx.edu (Erich Stefan Boleyn) (04/10/91)

neufeld@aurora.physics.utoronto.ca (Christopher Neufeld) writes:

...[deleted]...
>lengths to make diamond is that it doesn't matter how much energy you
>inject into graphite, it's not going to change to diamond until diamond
>is the stable allotrope.
>   Looking at a phase diagram of carbon, one can see that around 13500
>atmospheres diamond is the preferred phase at absolute zero. At
>increasing temperatures the diamond/graphite transition region rises in
>pressure, reaching 70000 atmospheres around 1400 Celcius, and at about
>215000 atmospheres and 3900 Celcius the graphite/diamond transition
>curve hits the solid/liquid transition line, which is pretty close to
>vertical (constant temperature) all the way down to the triple point at
>about 130 atmospheres. Note that this means that the ideal conditions
>for forming diamond are high pressure and LOW temperature. The hotter
>you make it, the harder you have to squeeze it to make diamond the
>stable allotrope.
...[references deleted]...
>the stable allotrope in the conditions under which you made it. If you
>have an efficient system which exposes all the graphite to the same
>conditions for a reasonable period of time, you should have essentially
>complete conversion to diamond.

   Hmmm...  I am definitely out of my knowledge depth here...  (nice
references though ;-)

   I know about the vapor deposition methods to a point, but the conditions
always have had to be very controlled.  My comments in an earlier posting
were partially referring to possible requirements in a non-pristine
environment, but I got sloppy.  The idea is to make these work in a
chemically rich (or at least non-void) environment, where energy could
be sapped off by nearby molecules, charges altered in a somewhat
unpredictable pattern, etc.  Any operation that takes a decent amount of
energy, and/or needs a very specific event to take place, and where
thermodynamic or chemical noise is a problem will of course cause a lot of
interference, or at least a much higher probability of failed reactions.

   Anyway, These deposition methods are still energy expensive.
Even supposing that you have high amounts of energy available that would not
damage your nanotech machinery (energy high enough to establish the carbon-
carbon pi sigma bonds are also high enough to pose possible danger to the
strutural integrity of your device ?), that is still a lot of energy to
direct locally.  Specific atom deposition has been done with slightly
modified scanning tunneling microscopes, but you have a large structure to
feed the energy in, if you need it (I am not too familiar with what has
actually been done, but I think they only placed the atoms onto the surface
bonded by bulk bonds (Van der Waals, polar, etc.), not molecular).  How would
the energy feed be done for a nanomachine?  Chemically?  It would have to
provide a good punch, so to speak...  current biological-chemical reactions
don't tend to be too high-energy...  (this is where I don't know what the
comparative energy levels would be, I'll check up on it).

>   The point of all this is that diamond would make a pretty good bone
>material. It isn't going to transform spontaneously into graphite inside
>a person's legs. I don't think there is much in the way of biological
>impediments to the evolution of diamond bones. When you ask why
>creatures haven't evolved diamond bones you might as well ask why they
>haven't evolved bulletproof skins, asbestos fur, or for that matter,
>warp drive. It just wasn't in the evolutionary dice.

   Moving around molecule subunits is easier than moving atoms, and calcium
has always been abundant as a free ion in cells, not to mention being used
by many other things.  One of the main problems would be to work with raw
carbon, and how to isolate that from the rest of the body.  Making bones is
a sloppy operation.

   I agree that it could be done, but think that it would involve some more
radical changes than are hinted at, no system in the body exists even in
semi-isolation.

   Erich

             "I haven't lost my mind; I know exactly where it is."
     / --  Erich Stefan Boleyn  -- \       --=> *Mad Genius wanna-be* <=--
    { Honorary Grad. Student (Math) }--> Internet E-mail: <erich@cs.pdx.edu>
     \  Portland State University  /        Phone #:  (503) 289-4635

[I think it's a bit premature to speculate about diamond fabrication
 inside a body just now!  It does seem that diamond fabrication is a
 reasonable thing to expect a molecular assembler to do, but the most
 I think we can deduce from this is that it is not UNreasonable to 
 design an assembler with diamond parts (the "matrix" or frame of a
 mechanical nanocomputer, for example...).
 BTW, I've personally seen a 6-inch synthetic diamond wafer made for
 use as a substrate in advanced electronics.  By the time diamond is
 made by nanotechnology, it won't be that uncommon as an engineering
 material.
 --JoSH]

landman@eng.sun.com (Howard A. Landman) (04/10/91)

In article <Apr.3.14.33.24.1991.24769@athos.rutgers.edu> toms@fcs260c2.ncifcrf.gov (Tom Schneider) writes:
>So why don't living things use diamond?
>
>Cells handle carbon structures all the time, so why are shells and structural
>components mostly silicon and calcuim?

There are lots of possible answers.  I think the most likely are:

1. It is difficult to build diamond at room temperature and
   pressure, and/or in aqueous solution.  Life just never
   happened to randomly develop a mutation capable of doing
   that in a way that had survival value.

2. Carbon is already very valuable to living organisms, but silicon
   (and maybe even calcium) are not so valuable, nor so flexible
   in their uses.  It makes sense to save the carbon for nanotech
   purposes (protein, DNA, energy storage) and use the simpler
   materials for bulk structural purposes.

3. Calcium comes in single-atom units that are easy to deposit.
   We don't really know how to grow a diamond one atom at a time,
   nor is there a plentiful source of single carbon atoms in
   most biological systems.  (Energy metabolism is based on pairs
   of carbon atoms - crudely, burning acetate units.)  Perhaps
   the best source is methionine, but such "active methyl" groups
   tend to be used for very specialized purposes.  (There was a good
   overview article on folate/B12/methionine metabolism in one volume
   of Advances in Nutritional Research a while back.)  Even then, you
   have a CH3- unit, so you have to figure out where to dispose of
   the hydrogens.  In summary, there isn't a convenient source of
   "pure carbon" unbonded to other elements.

Remember that "best" in a biological context is a very complicated
notion.  It involves questions of availability, feasibility, cost,
simplicity and reusability (why do you have fingers on your feet?),
as well as engineering considerations like strength.  Further, you
usually have to consider not just the organism but its competitors,
food sources, predators and environment.

--
	Howard A. Landman
	landman@eng.sun.com -or- sun!landman

neufeld@aurora.physics.utoronto.ca (Christopher Neufeld) (04/13/91)

In article <Apr.9.21.53.27.1991.26805@athos.rutgers.edu> erich@eecs.cs.pdx.edu (Erich Stefan Boleyn) writes:
>
>   Anyway, These deposition methods are still energy expensive.
>Even supposing that you have high amounts of energy available that would not
>damage your nanotech machinery (energy high enough to establish the carbon-
>carbon pi sigma bonds are also high enough to pose possible danger to the
>strutural integrity of your device ?), that is still a lot of energy to
>direct locally.
>
> [stuff deleted]
>
>How would
>the energy feed be done for a nanomachine?  Chemically?  It would have to
>provide a good punch, so to speak...  current biological-chemical reactions
>don't tend to be too high-energy...  (this is where I don't know what the
>comparative energy levels would be, I'll check up on it).
>
   Recall that the carbon atoms -> diamond synthesis is exothermal, so
the nanomachine doesn't have to channel the energy to form the bond, it
just has to stand out of the way. "Bond energies" refer to the binding
energy of the bond, or the energy which is released when the bond is
formed, not the energy required to make the bond. If that were the case,
every compound you see would realize that it could get to a lower energy
state by atomizing and the world would dissolve to gas. The nanomachine
would just have to be designed not to absorb the energy, which will be
primarily thermal energy released when the lattice rebounds from the new
carbon bond. Very little of that energy is likely to find its way back
to the nanomachine, if just because of acoustic impedance mismatches
between the crystal and the surrounding medium.

>>   The point of all this is that diamond would make a pretty good bone
>>material. It isn't going to transform spontaneously into graphite inside
>>a person's legs. I don't think there is much in the way of biological
>>impediments to the evolution of diamond bones.
>
>   Moving around molecule subunits is easier than moving atoms, and calcium
>has always been abundant as a free ion in cells, not to mention being used
>by many other things.  One of the main problems would be to work with raw
>carbon, and how to isolate that from the rest of the body.  Making bones is
>a sloppy operation.
>
   Now I'll stray far from my field. The diamond atoms in the crystal
form bonds with their four nearest neighbours in a tetragonal geometry,
akin to sp3 hybridization of atomic orbitals. This is also the geometry
of a methane molecule, and will be very close to the geometry of a
methyl group CH3. Not ever having gone above high school chemistry, I'd
design my diamond-building machines to be dominantly atomic step
extenders. They would come in with a methyl group on a long stick, and
would insert it at the edge of a step from one crystal plane to the
other. In doing so they would trade the methyl for the hydrogen on the
surface of the crystal, ie. the surface of the crystal would always be
fully hydrogenated, with the crystal being built by substituting a
methyl group for one or more hydrogens on the surface. Perhaps one in
every million nanomachines would be atomic step creators. They would
have the capacity to form a bond with the surface of a crystal plane,
instead of just the edge of one. This scheme would allow each crystal
plane to be manufactured to completion with fast growth along the face
of the crystal, and slow growth outward, to limit the formation of voids
and nanomachine inclusions.
   This scheme doesn't involve handling individual unbonded carbon
atoms, which are notoriously reactive, just the handling of methyl
groups which biological systems do all the time.


-- 
 Christopher Neufeld....Just a graduate student  | Flash: morning star seen
 neufeld@aurora.physics.utoronto.ca    Ad astra! | in evening! Baffled
 cneufeld@{pnet91,pro-cco}.cts.com               | astronomers: "could mean
 "Don't edit reality for the sake of simplicity" | second coming of Elvis!"

cloister@milton.u.washington.edu (cloister bell) (04/13/91)

diamond might make for nifty skeletons, but i wouldn't want to have it as bone
material.  i mention this because it seems likely that some will construe the
preceeding discussion into the area of artificial prostheses for
reconstructive surgery.  diamond has a very definite lattice structure, and
shatters under the right kind of blow.  this is why lapidaries can do rough
working of diamond with steel tools, which are softer than the diamonds.
while i have never personally seen a shattered diamond, i can only imagine
that the fragments are rather sharp, and would cause a *lot* of damage to the
fleshy bits before the doctors could get them out.  
-- 
+-------------------------------------------------+---------------------------+
|i thought of a good sig, but it was a sight gag. | cloister@u.washington.edu |
+-------------------------------------------------+---------------------------+

[No one, I trust, would try to make a bone or any other part with a similar
 function out of a single crystal of diamond ... imagine making a bone of
 glass.  Yet you can make tough, non-shatterable objects of fiberglass,
 and you could do the same thing with diamond if you wanted.
 --JoSH]

dietz@cs.rochester.edu (Paul Dietz) (04/13/91)

In article <Apr.9.22.03.31.1991.26994@athos.rutgers.edu> landman@eng.sun.com (Howard A. Landman) writes:

>In article <Apr.3.14.33.24.1991.24769@athos.rutgers.edu> toms@fcs260c2.ncifcrf.gov (Tom Schneider) writes:
>>So why don't living things use diamond?

>There are lots of possible answers.  I think the most likely are:
...
>2. Carbon is already very valuable to living organisms, but silicon
>   (and maybe even calcium) are not so valuable, nor so flexible
>   in their uses.  It makes sense to save the carbon for nanotech
>   purposes (protein, DNA, energy storage) and use the simpler
>   materials for bulk structural purposes.

There are plenty of forms of life that use carbon-containing compounds
in structural elements.  Plants (cellulose + lignin), arthropods
(chitin), mollusks (shells) and even vertebrates (cartilage, horn,
egg shells).  So this explanation seems dubious.

	Paul F. Dietz
	dietz@cs.rochester.edu

burns@latcs1.lat.oz.au (Jonathan Burns) (04/13/91)

I have wondered if a Graphite Assembler might not be an early nanotoy.

I imagine something with an adhesive tongue, which wanders over the surface
of an unstructured mass of graphite (e.g. soot), peels off a flake of the
substance a few layers of atoms thick and a hundred wide, then lays it
down flat on an existing surface, as if doing a jigsaw.

Considering the tensile strength of pyrolytically-produced graphite
fibres, this kind of thing might be surprisingly useful, especially
if doped for electronic or optical activity.


~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Jonathan Burns        | It's a bonanza when Veronica plays piannica
burns@latcs1.oz       | On my granda-momma's oldio piazzica
Computer Science Dept | With the whistle of the B and O
La Trobe University   | Booting out a obligatti-gattigo!  - LaFemme et Owl, '51
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

osan@cbnewsb.cb.att.com (andrew.vida-szucs) (04/13/91)

In article <Apr.3.14.33.24.1991.24769@athos.rutgers.edu> toms@fcs260c2.ncifcrf.gov (Tom Schneider) writes:
>
>I was reading one of Drexler's papers in the Nanocon 1989 proceedings, where he
>notes the possibility of creating diamond for structural components.  So I
>began to think of a shark with diamond tipped teeth.  Wouldn't that have an
>advantage over calcium?  Wouldn't a diatom or shrimp encased in diamond be able
>to survive better?  So why don't living things use diamond?  Or do they?  If
>they don't, is this telling us something about the limits of nanotechnology?
>That is, maybe diamond can ONLY be made at high pressures and/or temperatures,
>so a molecular machine couldn't do it, unless the machine operated under those
>conditions.
>
There are chemical deposition methods for creating artificial diamonds that 
require *no* high pressure conditions whatsoever.  In fact they require
partial vacuum conditions which may explain why it does not occur in living
organisms.  These techniques use (i believe) methane gas as the carbon source.
They were initially developed by Exxon oh, maybe 20 years ago but only in the
past year or so have they been refined to the point where they are commercially
viable.  There was an article in the Wall Street Journal several months back.
It seems that just about *any* shape can be produced using this method.  

I don't (though am not sure) think that this method will produce gem quality 
stones, so don't rush out to get your equipment.

There is one creature I know of that has *carbide* teeth.  It is some sort of
animal in a shell whose name I forget at the moment and in its mouth there is
a circle of small rectangular (Tungsten??) carbide teeth that it uses to grind
away at the reef on which it lives.  They exist somewhere in the South Pacific
maybe Polynesia or where have you.

Any how, that's about it regarding my knowledge of synthetic diamond.

 

Howard.Landman@eng.sun.com (Howard A. Landman) (04/19/91)

In article <Apr.12.16.34.48.1991.7800@athos.rutgers.edu> neufeld@aurora.physics.utoronto.ca (Christopher Neufeld) writes:
>I'd design my diamond-building machines to be dominantly atomic step
>extenders. They would come in with a methyl group on a long stick, and
>would insert it at the edge of a step from one crystal plane to the
>other. In doing so they would trade the methyl for the hydrogen on the
>surface of the crystal, ie. the surface of the crystal would always be
>fully hydrogenated, with the crystal being built by substituting a
>methyl group for one or more hydrogens on the surface.
                      ^^ ^^^^
The two words "or more" are critical here.  Without their presence,
I can prove mathematically that the above process doesn't work, i.e.
is incapable of producing a diamond lattice.  There are at least two
approaches, one graph-theoretical, one combinatorial.  Before you
look at my proofs, you should pause to try to think this through.
It's actually pretty obvious.


THE GRAPH-THEORETICAL PROOF

A diamond lattice, considered as a graph, contains many cycles.
Substituting a methyl radical for a hydrogen does not create a
cycle.  Therefore, if we define a "diamond" carbon atom to be one
that is contained in at least one cycle, such a step is incapable
of creating a new "diamond" atom.  In fact, if we start with a tree
(connected acyclic graph), each step leaves us with a tree.
Starting from methane, all you can build are saturated hydrocarbons.

THE COMBINATORIAL PROOF

Diamond is pure carbon.  Therefore, any process to produce diamond
must end up with mostly pure carbon.  When you replace a hydrogen
with a methyl radical, you add one carbon atom but also add (net)
two hydrogen atoms.  Thus the asymptotic composition of the product
must be two hydrogens for every carbon, which is not diamond, but
something more like polyethylene.

The first proof implies that we need to have at least one step in
any diamond building procedure which closes loops.  The second
proof implies that we need to have at least one step in any such
procedure which removes (net) hydrogen without removing carbon
(this could of course be the same step that closes loops), OR that
the step which adds a methyl carbon removes ON AVERAGE about three
hydrogen atoms.  Not so simple sounding anymore, is it?

--
	Howard A. Landman
	landman@eng.sun.com -or- sun!landman

neufeld@aurora.physics.utoronto.ca (Christopher Neufeld) (04/20/91)

In article <Apr.19.00.30.48.1991.841@athos.rutgers.edu> Howard.Landman@eng.sun.com (Howard A. Landman) writes:
>
>In article <Apr.12.16.34.48.1991.7800@athos.rutgers.edu> neufeld@aurora.physics.utoronto.ca (Christopher Neufeld) writes:
>>I'd design my diamond-building machines to be dominantly atomic step
>>extenders. They would come in with a methyl group on a long stick, and
>>would insert it at the edge of a step from one crystal plane to the
>>other. In doing so they would trade the methyl for the hydrogen on the
>>surface of the crystal, ie. the surface of the crystal would always be
>>fully hydrogenated, with the crystal being built by substituting a
>>methyl group for one or more hydrogens on the surface.
>                      ^^ ^^^^
>The two words "or more" are critical here.  Without their presence,
>I can prove mathematically that the above process doesn't work, i.e.
>is incapable of producing a diamond lattice.  There are at least two
>approaches, one graph-theoretical, one combinatorial.  Before you
>look at my proofs, you should pause to try to think this through.
>It's actually pretty obvious.
>
   Of course it is. A methyl is carbon and three hydrogens, so on
average you have to discard three hydrogens for every carbon laid down.
I'm surprised that you critisize me on the basis of something which I
might have left out to make my statement incorrect, but didn't.
   I said what I did because I thought that it might make more sense for
the device to be designed to grow planes normal to the (-1,1,1)
direction than the (0,0,1) direction. In that geometry half the methyl
additions yield one hydrogen, and the other half yield five hydrogens.
This is not likely to be something which a single machine can do, so the
principle axis growth is more likely, I just thought I'd cover all
possibilities.

>OR that
>the step which adds a methyl carbon removes ON AVERAGE about three
>hydrogen atoms.  Not so simple sounding anymore, is it?
>
   It's not simple in the first place. I'm just mentioning a way which
might, I think, make it easier. You don't want your nanomachines to
crawl over the surface of a diamond crystal with hanging carbon bonds or
you'll stick tight. Hydrogenating the surface bonds serves two
functions, one to make the crystal less sticky and the add-on units more
manageable, and two to set it up with the correct electron orbital
geometry. There's still the problem of how to fling those hydrogens out
of there in the first place, perhaps with a highly electronegative
bonding site which could be tucked in between the carbons to grab out
the hydrogen. Candidates are nitrogen and oxygen. Flourine won't work
unless you can make it polyvalent. You then pull out the arm with the
hydrogens attached, leaving the carbon bonds essentially unchanged but
unbonded. "Essentially unchanged" could mean a deflection of a few
degrees, with the bond angle of water being a good example.
   I'm not a chemist, so this might all be nonsense.

>	Howard A. Landman
>	landman@eng.sun.com -or- sun!landman


-- 
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