Kristofferson@BIONET-20.BIO.NET (David Kristofferson) (12/23/88)
JOURNAL OF BACTERIOLOGY Volume 171 January 1989 No. 1 STRUCTURE AND FUNCTION Mechanism of Pneumococcal Cell Wall Degradation In Vitro and In Vivo. Jose Garcia-Bustos and Alexander Tomasz 114-119 Three-Dimensional Structure of an Open Form of the Surface Layer from the Fish Pathogen Aeromonas salmonicida. J. S. G. Dooley, H. Engelhardt, W. Baumeister, W. W. Kay, and Trevor J. Trust 190-197 Chromosome and Cell Wall Segregation in Streptococcus faecium ATCC 9790. Michael L. Higgins, David Glaser, David T. Dicker, and Edward T. Zito 349-352 Turning Off Flagellum Rotation Requires the Pleiotropic Gene pleD: pleA, pleC, and pleD Define Two Morphogenic Pathways in Caulobacter crescentus. Jurg M. Sommer and Austin Newton 392-401 Peptidoglycan-Polysaccharide Complex in the Cell Wall of the Filamentous Pro- chlorophyte Prochlorothrix hollandica. Uwe J. Jurgens and Tineke Burger- Wiersma 498-502 Nucleotide Sequence of the rodA Gene, Responsible for the Rod Shape of Esche- richia coli: rodA and the pbpA Gene, Encoding Penicillin-Binding Protein 2, Constitute the rodA Operon. Hiroshi Matsuzawa, Sadamitsu Asoh, Kenji Kunai, Kanae Muraiso, Akiko Takasuga, and Takahisa Ohta 558-560 PLANT MICROBIOLOGY Rhizobium leguminosarum CFN42 Genetic Regions Encoding Lipopolysaccharide Structures Essential for Complete Nodule Development on Bean Plants. Joseph R. Cava, Pappi M. Elias, Debra A. Turowski, and K. Dale Noel 8-15 Isolation of a Rhizobium phaseoli Cytochrome Mutant with Enhanced Respiration and Symbiotic Nitrogen Fixation. Mario Soberon, Huw D. Williams, Robert K. Poole, and Edgardo Escamilla 465-472 Roles of Flagella, Lipopolysaccharide, and a Ca2+-Dependent Cell Surface Pro- tein in Attachment of Rhizobium leguminosarum Biovar viciae to Pea Root Hair Tips. Gerrit Smit, Jan W. Kijne, and Ben J. J. Lugtenberg 569-572 Protoporphyrinogen Oxidation, a Step in Heme Synthesis in Soybean Root Nod- ules and Free-Living Rhizobia. Nicholas J. Jacobs, Susan E. Borotz, and Mary Lou Guerinot 573-576 GENETICS AND MOLECULAR BIOLOGY Genetic Relationship of Two Highly Studied Synechococcus Strains Designated Anacystis nidulans. Susan S. Golden, Mark S. Nalty, and Dan-Sung C. Cho 24-29 Altered Induction of the Adaptive Response to Alkylation Damage in Escherichia coli recF Mutants. Michael R. Volkert 99-103 Molecular Characterization of the cysJIH Promoters of Salmonella typhimurium and Escherichia coli: Regulation by cysB Protein and N-Acetyl-l-Serine. Jacek Ostrowski and Nicholas M. Kredich 130-140 Distribution of 5,-Triphosphate Termini on the mRNA of Escherichia coli. Charles D. Bieger and Donald P. Nierlich 141-147 Sequence of the Pseudomonas aeruginosa trpI Activator Gene and Relatedness of trpI to Other Procaryotic Regulatory Genes. Ming Chang, Ayele Hadero, and Irving P. Crawford 172-183 Homologous Metalloregulatory Proteins from Both Gram-Positive and Gram- Negative Bacteria Control Transcription of Mercury Resistance Operons. John D. Helmann, Ying Wang, Inga Mahler, and Christopher T. Walsh 222-229 Homology between VirF, the Transcriptional Activator of the Yersinia Virulence Regulon, and AraC, the Escherichia coli Arabinose Operon Regulator. Guy Cornelis, Christine Sluiters, Catherine Lambert de Rouvroit, and Thomas Michiels 254-262 Mutations in uvrD Induce the SOS Response in Escherichia coli. Nina Ossanna and David W. Mount 303-307 Chlamydial Gene Encoding a 70-Kilodalton Antigen in Escherichia coli: Analysis of Expression Signals and Identification of the Gene Product. Lisa M. Sardinia, Joanne N. Engel, and Don Ganem 335-341 Escherichia coli s54 RNA Polymerase Recognizes Caulobacter crescentus flbG and flaN Flagellar Gene Promoters In Vitro. Alexander J. Ninfa, David A. Mullin, Girija Ramakrishnan, and Austin Newton 383-391 Hypervariability, a New Phenomenon of Genetic Instability, Related to DNA Amplification in Streptomyces ambofaciens. Pierre Leblond, Philippe Demuyter, Laurence Moutier, Mohamed Laakel, Bernard Decaris, and Jean-Marc Simonet 419-423 Structural and Functional Analysis of Transcriptional Control of the Rhodo- bacter capsulatus puf Operon. Camellia W. Adams, Mary E. Forrest, Stanley N. Cohen, and J. Thomas Beatty 473-482 A 20-Kilodalton Protein Is Required for Efficient Production of the Bacillus thuringiensis subsp. israelensis 27-Kilodalton Crystal Protein in Escherichia coli. Lee F. Adams, Jonathan E. Visick, and H. R. Whiteley 521-530 Gene Replacement and Retrieval with Recombinant M13mp Bacteriophages. Paul Blum, Donald Holzschu, Hoi-Shan Kwan, Daniel Riggs, and Stanley Artz 538-546 Evidence for an Additional Temporal Class of Gene Expression in the Forespore Compartment of Sporulating Bacillus subtilis. Scott Panzer, Richard Losick, Dongxu Sun, and Peter Setlow 561-564 recB and recC Genes of Salmonella typhimurium. Michael J. Mahan and John R. Roth 612-615 PLASMIDS AND TRANSPOSONS Site-Specific Integration in Streptomyces ambofaciens: Localization of Integra- tion Functions in S. ambofaciens Plasmid pSAM2. S. Kuhstoss, M. A. Richardson, and R. Nagaraja Rao 16-23 Protein-DNA Interactions in Regulation of P1 Plasmid Replication. Ann L. Abeles, Lucretia D. Reaves, and Stuart J. Austin 43-52 Involvement of Tn4430 in Transfer of Bacillus anthracis Plasmids Mediated by Bacillus thuringiensis Plasmid pXO12. Brian D. Green, Laurie Battisti, and C. B. Thorne 104-113 Novel Aerobic Tetracycline Resistance Gene That Chemically Modifies Tetracycline. Brenda S. Speer and Abigail A. Salyers 148-153 Nucleotide Sequence of traQ and Adjacent Loci in the Escherichia coli K-12 F-Plasmid Transfer Operon. June H. Wu and Karin Ippen-Ihler 213-221 Phenoxyacetic Acid Degradation by the 2,4-Dichlorophenoxyacetic Acid (TFD) Pathway of Plasmid pJP4: Mapping and Characterization of the TFD Regulatory Gene, tfdR. Alan R. Harker, Ronald H. Olsen, and Ramon J. Seidler 314-320 virG, a Plasmid-Coded Virulence Gene of Shigella flexneri: Identification of the virG Protein and Determination of the Complete Coding Sequence. Marie- Claire Lett, Chihiro Sasakawa, Nobuhiko Okada, Takashi Sakai, Souich Makino, Masatoshi Yamada, Keiko Komatsu, and Masanosuke Yoshikawa 353-359 Homology of Mycoplasma Plasmid pADB201 and Staphylococcal Plasmid pE194. Andrew D. Bergemann, Jane C. Whitley, and Lloyd R. Finch 593-595 EUCARYOTIC CELLS Evidence for the Involvement of a Cytoplasmic Factor in the Aging of the Yeast Saccharomyces cerevisiae. Nejat K. Egilmez and S. Michal Jazwinski 37-42 Deoxyglucose-Resistant Mutants of Neurospora crassa: Isolation, Mapping, and Biochemical Characterization. Kenneth E. Allen, Mark T. McNally, Henry S. Lowendorf, Carolyn W. Slayman, and Stephen J. Free 53-58 The REV1 Gene of Saccharomyces cerevisiae: Isolation, Sequence, and Functional Analysis. Frank W. Larimer, Jack R. Perry, and Alice A. Hardigree 230-237 CELL SURFACES Lactose Transport System of Streptococcus thermophilus: a Hybrid Protein with Homology to the Melibiose Carrier and Enzyme III of Phosphoenolpyruvate- Dependent Phosphotransferase Systems. Bert Poolman, Theresa J. Royer, Stanley E. Mainzer, and Brian F. Schmidt 244-253 Characterization and Sequence Analysis of the scrA Gene Encoding Enzyme IIScr of the Streptococcus mutans Phosphoenolpyruvate-Dependent Sucrose Phos- photransferase System. Yutaka Sato, Florence Poy, Gary R. Jacobson, and Howard K. Kuramitsu 263-271 Identification by Sequence Analysis of Two-Site Posttranslational Processing of the Cysteine-Rich Outer Membrane Protein 2 of Chlamydia trachomatis Serovar L2. Judith E. Allen and Richard S. Stephens 285-291 Expression of the Rhodobacter sphaeroides Cytochrome c2 Structural Gene. Janine P. Brandner, Alastair G. McEwan, Samuel Kaplan, and Timothy J. Donohue 360-368 Novel secA Alleles Improve Export of Maltose-Binding Protein Synthesized with a Defective Signal Peptide. John D. Fikes and Philip J. Bassford, Jr. 402-409 Amino Acid Sequence and Length Requirements for Assembly and Function of the Colicin A Lysis Protein. S. Peter Howard, DaniAele Cavard, and Claude Lazdunski 410-418 Structure and Glycosylation of Lipoteichoic Acids in Bacillus Strains. Hiroyoshi Iwasaki, Akira Shimada, Kohei Yokoyama, and Eiji Ito 424-429 Control of Photosynthetic Membrane Assembly in Rhodobacter sphaeroides Mediated by puhA and Flanking Sequences. R. Elizabeth Sockett, Timothy J. Donohue, Amy R. Varga, and Samuel Kaplan 436-446 Isolation of Mutants and Genes Involved in Cytochromes c Biosynthesis in Rhodobacter capsulatus. Robert G. Kranz 456-464 Active Transport of Maltose in Membrane Vesicles Obtained from Escherichia coli Cells Producing Tethered Maltose-Binding Protein. David A. Dean, John D. Fikes, Kalle Gehring, Philip J. Bassford, Jr., and Hiroshi Nikaido 503-510 Sequence of an Osmotically Inducible Lipoprotein Gene. Jae U. Jung, Claude Gutierrez, and Merna R. Villarejo 511-520 Characterization of Three Choline Transport Activities in Rhizobium meliloti: Modulation by Choline and Osmotic Stress. Jean-Alain Pocard, Theophile Bernard, Linda Tombras Smith, and Daniel Le Rudulier 531-537 Identification and Genetic Mapping of the Structural Gene for an Essential Escherichia coli Membrane Protein. Michael G. Williams, Mark Fortson, Christine C. Dykstra, Peter Jensen, and Sidney R. Kushner 565-568 Conditionally Lethal Amber Mutations in the Leader Peptidase Gene of Escherichia coli. Toshifumi Inada, Donald L. Court, Koreaki Ito, and Yoshikazu Nakamura 585-587 Chemotaxis Mutants of Spirochaeta aurantia. Kathy Fosnaugh and E. P. Greenberg 606-611 Export-Defective LamB Protein Is a Target for Translational Control Caused by OmpC Porin Overexpression. Eva Marie Click and Carl A. Schnaitman 616-619 PHYSIOLOGY AND METABOLISM Involvement of Coenzyme A Thioesters in Anaerobic Metabolism of 4-Hydroxy- benzoate by Rhodopseudomonas palustris. Susan M. Merkel, Anatol E. Eberhard, Jane Gibson, and Caroline S. Harwood 1-7 Elongation of Exogenous Fatty Acids by the Bioluminescent Bacterium Vibrio harveyi. David M. Byers 59-64 Termination of DNA Replication Is Required for Cell Division in Escherichia coli. Nili Grossman, Esther Rosner, and Eliora Z. Ron 74-79 Apparent Minimal Size Required for Cell Division in Escherichia coli. Nili Grossman and Eliora Z. Ron 80-82 Nucleotide Sequence of a Chromosomal Mercury Resistance Determinant from a Bacillus sp. with Broad-Spectrum Mercury Resistance. Ying Wang, Melissa Moore, Hillel S. Levinson, Simon Silver, Christopher Walsh, and Inga Mahler 83-92 Functional Homology of Chemotactic Methylesterases from Bacillus subtilis and Escherichia coli. David O. Nettleton and George W. Ordal 120-123 Genetic Evidence for an Azotobacter vinelandii Nitrogenase Lacking Molybdenum and Vanadium. Richard N. Pau, Lesley A. Mitchenall, and Robert L. Robson 124-129 Altered Cobalamin Metabolism in Escherichia coli btuR Mutants Affects btuB Gene Regulation. Michael D. Lundrigan and Robert J. Kadner 154-161 Isolation, Sequence, and Expression in Escherichia coli of an Unusual Thioredoxin Gene from the Cyanobacterium Anabaena sp. Strain PCC 7120. Jawed Alam, Stephanie Curtis, Florence K. Gleason, Maryam Gerami-Nejad, and James A. Fuchs 162-171 Cloning, Nucleotide Sequence, and Expression in Escherichia coli of the Gene for Poly(3-Hydroxybutyrate) Depolymerase from Alcaligenes faecalis. Terumi Saito, Kenji Suzuki, Jun Yamamoto, Tetsuya Fukui, Keiko Miwa, Kenkichi Tomita, Shigetada Nakanishi, Shoji Odani, Jun-ichi Suzuki, and Kiichi Ishikawa 184-189 Identification and Sequence Analysis of Escherichia coli purE and purK Genes Encoding 5'-Phosphoribosyl-5-Amino-4-Imidazole Carboxylase for De Novo Purine Biosynthesis. Wakako Watanabe, Gen-ichi Sampei, Atsu Aiba, and Kiyoshi Mizobuchi 198-204 Nucleotide Sequence Analysis of the purEK Operon Encoding 5',-Phosphoribosyl-5- Aminoimidazole Carboxylase of Escherichia coli K-12. Amelia A. Tiedeman, Jacqueline Keyhani, John Kamholz, Henry A. Daum III, Joseph S. Gots, and John M. Smith 205-212 Mechanistically Novel Iron(III) Transport System in Serratia marcescens. Luitgard Zimmermann, Annemarie Angerer, and Volkmar Braun 238-243 Transport of Amino Acids in Lactobacillus casei by Proton-Motive-Force-Depen- dent and Non-Proton-Motive-Force-Dependent Mechanisms. Herbert J. Strobel, James B. Russell, Arnold J. M. Driessen, and Wil N. Konings 280-284 Mechanism and Energetics of Dipeptide Transport in Membrane Vesicles of Lac- tococcus lactis. Eddy J. Smid, Arnold J. M. Driessen, and Wil N. Konings 292-298 Lysine Catabolism in Streptomyces spp. Is Primarily through Cadaverine: b-Lac- tam Producers Also Make a-Aminoadipate. K. Madduri, C. Stuttard, and L. C. Vining 299-302 Isolation and Nucleotide Sequencing of an Aminocyclitol Acetyltransferase Gene from Streptomyces rimosus forma paromomycinus. Manuel Lopez-Cabrera, Jose Antonio Perez-Gonzalez, Peter Heinzel, Wolfgang Piepersberg, and Antonio Jimenez 321-328 Biochemical Characterization of Two Cloned Resistance Determinants Encoding a Paromomycin Acetyltransferase and a Paromomycin Phosphotransferase from Streptomyces rimosus forma paromomycinus. Jose Antonio Perez- Gonzalez, Manuel Lopez-Cabrera, Jose Manuel Pardo, and Antonio Jimenez 329-334 Mutants of Escherichia coli Deficient in the Fermentative Lactate Dehydrogenase Fairoz Mat-Jan, Kiswar Y. Alam, and David P. Clark 342-348 A Single Gene Directs Synthesis of a Precursor Protein with b- and a-Amylase Activities in Bacillus polymyxa. Nobuyuki Uozumi, Kyoko Sakurai, Takuji Sasaki, Shiro Takekawa, Hideo Yamagata, Norihiro Tsukagoshi, and Shigezo Udaka 375-382 Acinetobacter calcoaceticus Genes Involved in Biosynthesis of the Coenzyme Pyr- rolo-Quinoline-Quinone: Nucleotide Sequence and Expression in Escherichia coli K-12. Nora Goosen, Harold P. A. Horsman, Rene G. M. Huinen, and Pieter van de Putte 447-455 Physiological Studies of the Regulation of b-Lactamase Expression in Pseudomo- nas maltophilia. Sabine Rosta and Helmut Mett 483-487 Cloning and Analysis of Genes Involved in Coenzyme B12 Biosynthesis in Pseudo- monas denitrificans. Beatrice Cameron, Kathleen Briggs, Sylvie Pridmore, Georges Brefort, and Joel Crouzet 547-557 Cloning, Expression, and Nucleotide Sequence of the Escherichia coli K-12 ackA Gene. Asahi Matsuyama, Hideko Yamamoto, and Eiichi Nakano 577-580 Sequence Analysis of the agrA Gene Encoding b-Agarase from Pseudomonas atlantica. Robert Belas 602-605 Nucleotide Sequence of a Citrate Utilization Gene from Citrobacter amalonati- cus. Hirohiko Daimon, Naotaka Ishiguro, Morikazu Shinagawa, and Gihei Sato 620-623 ENZYMOLOGY Purification and Characterization of a Dimeric Phenylalanine Dehydrogenase from Rhodococcus maris K-18. Haruo Misono, Junichi Yonezawa, Shinji Nagata, and Susumu Nagasaki 30-36 Amino Acid Sequence of Cytochrome c-552 from a Thermophilic Hydrogen- Oxidizing Bacterium, Hydrogenobacter thermophilus. Yoshihiro Sanbongi, Masaharu Ishii, Yasuo Igarashi, and Tohru Kodama 65-69 Nucleotidylation, Not Phosphorylation, Is the Major Source of the Phosphotyro- sine Detected in Enteric Bacteria. Rosemary Foster, Jeremy Thorner, and G. Steven Martin 272-279 Susceptibility of Rhodobacter sphaeroides to b-Lactam Antibiotics: Isolation and Characterization of a Periplasmic b-Lactamase (Cephalosporinase). Maritta Baumann, Horst Simon, Karl-Heinz Schneider, Hans-JCurgen Danneel, Uta KCuster, and Friedrich Giffhorn 308-313 Pattern of Action of Bacillus stearothermophilus Neopullulanase on Pullulan. Tadayuki Imanaka and Takashi Kuriki 369-374 Immunological Relationship among Hydrogenases. Kornel L. Kovacs, Lance C. Seefeldt, Gabor Tigyi, Charles M. Doyle, Leonard E. Mortenson, and Daniel J. Arp 430-435 Nucleotide Sequence of the Gene for Cholesterol Oxidase from a Streptomyces sp. Tomoyuki Ishizaki, Noriaki Hirayama, Hidenori Shinkawa, Osamu Nimi, and Yoshikatsu Murooka 596-601 BACTERIOPHAGES Isolation and Characterization of an Archaebacterial Viruslike Particle from Methanococcus voltae A3. Alvin G. Wood, William B. Whitman, and Jordan Konisky 93-98 Cloning and Identification of Bacteriophage T4 Gene 2 Product gp2 and Action of gp2 on Infecting DNA In Vivo. Barbara Lipinska, A. S. M. Krishna Rao, Barbara M. Bolten, Ramaswami Balakrishnan, and Edward B. Goldberg 488-497 Retroregulation of the Bacteriophage Lambda int Gene: Limited Secondary Deg- radation of the RNase III-Processed Transcript. Guy Plunkett III and Harrison Echols 588-592 POPULATION GENETICS AND EVOLUTION Characterization and Taxonomic Implications of the rRNA Genes of Mycobacterium leprae. S. Sela, J. E. Clark-Curtiss, and H. Bercovier 70-73 Duplication of the tuf Gene: a New Insight into the Phylogeny of Eubacteria. S. Sela, D. Yogev, S. Razin, and H. Bercovier 581-584 ERRATA Dextransucrase Secretion in Leuconostoc mesenteroides Depends on the Presence of a Transmembrane Proton Gradient. David R. Otts and Donal F. Day 624 Phenotypic Switching of Thiobacillus ferrooxidans. Janet A. Schrader and David S. Holmes 624 Date of Issue: 28 December 1988 -------
elliston@rob.UUCP ( Keith Elliston) (12/25/88)
Would it be possible to post the tables of contents in some standard form, perhaps like that of the abstracts from BRS or the other online services? This would make it possible to download the TOC's and put them up into a local database, making the info available for searching. This might make the posting of these things much more useful for those of us on the NETS. I would propose something simple like: AU the authors name would be listed here JO the journal name and citation (pages.. etc.) SU some subject keywords... TI the title. THis would facilitate loading these TOC's into a simple database... What do y'all think?? Keith ============================================================================= Keith O. Elliston UUNET: ...rob!elliston Biological Data Analyst Arpanet: rob!elliston@UUNET.UU.NET Merck & Co. Bitnet: rob!elliston%UUNET.UU.NET@CUNYVM ============================================================================= Biological Data
kristoff@NET.BIO.NET (David Kristofferson) (12/29/88)
Posting Tables of Contents in a standard format is a great suggestion. Unfortunately I don't have enough staff to handle our current workload, and any new feature like this has to be brought on board in a form that minimizes our labor. Perhaps some public spirited type could do the reformatting and post the revised version!!?? -- Sincerely, Dave Kristofferson BIONET Resource Manager kristoff@net.bio.net or kristofferson@bionet-20.bio.net
sys_ms@bmc.uu.se (Mats Sundvall) (12/31/88)
In article <304@rob.UUCP>, elliston@rob.UUCP ( Keith Elliston) writes: First of all I want to say that posting of the table of contents is a great idea. > Would it be possible to post the tables of contents in some standard form, > perhaps like that of the abstracts from BRS or the other online services? > This would make it possible to download the TOC's and put them up into a > local database, making the info available for searching. This might make > the posting of these things much more useful for those of us on the NETS. > > I would propose something simple like: > > AU the authors name would be listed here > JO the journal name and citation (pages.. etc.) > SU some subject keywords... > TI the title. > > THis would facilitate loading these TOC's into a simple database... > > What do y'all think?? > I agree. I hope somebody can put together a program to reformat the table of contents into something that all the reference handling softwares can use as input. > > Keith > > ============================================================================= > Keith O. Elliston UUNET: ...rob!elliston > Biological Data Analyst Arpanet: rob!elliston@UUNET.UU.NET > Merck & Co. Bitnet: rob!elliston%UUNET.UU.NET@CUNYVM ============================================================================= > > Biological Data -- Mats Sundvall Biomedical Center +46/18174583 University of Uppsala Mats.Sundvall@BMC.UU.SE Sweden psi%24020019700620::MATS