KRISTOFFERSON@BIONET-20.ARPA (12/10/87)
From: David Kristofferson <Kristofferson@BIONET-20.ARPA>
The following info is excerpted from a message from Doug Brutlag. The
files referred to are usable in the QUEST program.
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Mail-From: BRUTLAG created at 20-Nov-87 15:14:48
Date: Fri 20 Nov 87 15:14:48-PST
From: Doug Brutlag <brutlag@BIONET-20.ARPA>
Subject: Re: concensus sequences++
To: chas@stork.bcm.tmc.edu.mx
cc: kristofferson@BIONET-20.ARPA
In-Reply-To: <8711201958.AA00211@stork.bcm.tmc.edu>
Message-ID: <12352217051.23.BRUTLAG@BIONET-20.ARPA>
Charlie,
.
.
.
Also, the files you want are on Bionet. The file <IG>GNOMIC.KEY
has all of the non tandemly repeated consensus sequences longer than 3
bases (I did not want to keep codons in the consensus table). The file
<IG>TANDEM.KEY has all of the tandem repeats from GNOMIC. Both files
are built from sequences sent to us by Trifonov. Also he did not
include the restriction enzyme cleavage sites in these files and you can
find those in <IG>REST.KEY or a more up-to-date list in
<BRUTLAG>REST.KEY.
Cheers,
Doug
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