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Date: Fri 24 Mar 89 12:00:51-PST
From: Sunil Maulik <MAULIK@BIONET-20.BIO.NET>
Subject: Re: computer matching of 2D gel patterns
To: beverly@AI.CS.WISC.EDU
cc: bionet-methods-and-reagents-arpanet@SPOOL.CS.WISC.EDU,
MAULIK@BIONET-20.BIO.NET
In-Reply-To: <8903171858.AA14745@net.bio.net>
Message-ID: <12480632303.23.MAULIK@BIONET-20.BIO.NET>
No,
but the following database and software service may be of use to you
(and others using 2D gels in protein analysis):
@find gel in bc:limb.dat
* . . .
* Cold Spring Harbor, NY 11724
* U.S.A.
*res.tel 516-367-8356
*res.net -
*gen.nam Cecile Chang
*gen.add Cold Spring Harbor Laboratory
* P.O. Box 100
* Cold Spring Harbor, NY 11724
* U.S.A.
*gen.tel 516-367-8356
*gen.net -
*con.nam James I. Garrels
*con.add Cold Spring Harbor Laboratory
* P.O. Box 100
* Cold Spring Harbor, NY 11724
* U.S.A.
*con.tel 516-367-8356
*con.net -
*acc.nam James I. Garrels
*acc.add Cold Spring Harbor Laboratory
* P.O. Box 100
* Cold Spring Harbor, NY 11724
* U.S.A.
*acc.tel 516-367-8356
*acc.net -
>name.now Quest 2D Gel Protein Database
*name.alt QTDGPD
*name.bad -
*source -
*collab.in -
*collab.ou -
*funding NIH Resource Grant
*citation Proujan,B.J. (1988) "Research Service: Protein Databases Available"
* <Research Resources Reporter> February, 13-14.
*charter The major aim is to identify many of the spots on the protein map
* with basic characterizations of the rat, mouse and yeast cell
* protein patterns including basic regulatory responses,
* phosphorylation patterns of subcellular fractions and turnover
* rates. The gels have been specially formulated to routinely provid
e
* high resolution and reproducibility.
*cross -
*data.pri two-dimensional protein separation gel spots.
*data.sec [protein] properties; spot quality; spot coordinates.
*hardware MASSCOMP
*operate UNIX
*dbms commercial version is available from Protein Databases Inc.
*language C
*format -
*software none
*access available on a collaborative basis
*update daily
* . . .
* . . .
* rates. The gels have been specially formulated to routinely provid
e
* high resolution and reproducibility.
*cross -
*data.pri two-dimensional protein separation gel spots.
*data.sec [protein] properties; spot quality; spot coordinates.
*hardware MASSCOMP
*operate UNIX
*dbms commercial version is available from Protein Databases Inc.
*language C
*format -
*software none
*access available on a collaborative basis
*update daily
*con.onl no
*con.mag no
*con.flp no
*con.elm no
*con.pap no
*acc.onl no
*acc.mag yes
*acc.flp no
*acc.elm no
*acc.pap yes
*byt.all 10,000,000
*byt.pri 400,000
>ent.pri 200,000 (100 gels with 2,000 spots each)
*comment QTDGPD accepts 2D gel samples to be analyzed and entered into
* the database.
*///
2 hits on key "gel" in bc:limb.dat.
@
Sincerely,
Sunil Maulik
Senior Scientific Consultant
BIONET
(415)-962-7342
Internet:Maulik@bionet-20.bio.net
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