AJB@dlvh.daresbury.ac.uk (02/13/91)
I'd be grateful if anyone could point me in the direction of such a thing. It'd make translation of orfs from nucleic acid database sequences much easier. Thanks in advance Alan Bleasby SERC Daresbury Laboratory Daresbury Warrington WA4 4AD UK Email: AJB@DLVH.DARESBURY.AC.UK
toms@fcs260c2.ncifcrf.gov (Tom Schneider) (02/14/91)
In article <9102122255.AA27052@genbank.bio.net> AJB@dlvh.daresbury.ac.uk writes: Codon usage databases: >I'd be grateful if anyone could point me in the direction of such a thing. Embl server NETHELP@EMBL.bitnet (I think) * CodonUsage * A collection of codon frequency tables, produced by J.M. Cherry, was kindly provided by Don Gilbert, Indiana, and is stored in the directory CODONUSAGE. Codon usage information is available for Drosophila, human, mouse, sea urchin, S. pombe and S. saccharomyces. All files are in the format required by the GCG sequence analysis package. and modl.unibas.ch Biocomputing server 131.152.1.2 Biozentrum, Universitaet Basel (/biology/EMBnet) EMBL ( updated daily) (/biology/databases) many databases,e.g. alu sequences list SwissEnzyme, Prosite GCG (3) format codon tables Reinhard Doelz, Journal tables of contents doelz@urz.unibas.ch LiMB,TFD,ECD,EPD,REBASE,DROS >Alan Bleasby >SERC Daresbury Laboratory >Daresbury >Warrington WA4 4AD >UK >Email: AJB@DLVH.DARESBURY.AC.UK Tom Schneider National Cancer Institute Laboratory of Mathematical Biology Frederick, Maryland 21702-1201 toms@ncifcrf.gov