SANDRO@if1.ufrgs.anrs.br (06/26/91)
Hi,
I am needing a set of aligned (by secundary structure)
sequences of small, large and 5S rRNA genes for a phylogenetic
study. I am aware of the existence of compilations and data
banks of such sequences, but I would like to get them by Email.
Can anyone help me with electronic addresses or other
information ?
Thanks in advance,
===========================================
Sandro L. Bonatto
Departamento de Genetica
Universidade Federal do Rio Grande do Sul
Porto Alegre, RS, BRASIL
Bitnet: SANDRO@IF1.UFRGS.ANRS.BR
===========================================cb@INTRON.LANL.GOV (Christian Burks) (06/27/91)
Your query about databases might be answered by browsing through the LiMB database, which is a directory of molecular biology and related databases. You can acquire a copy of LiMB by send an e-mail message to "bioserve@genome.lanl.gov" that contains the single word, "limb-data", in the message text. - LiMB Database Manager LiMB Database T-10, MS K710 Los Alamos National Laboratory Los Alamos, NM 87545 e-mail: limb@genome.lanl.gov fax: 505-665-3493
harper@nic.funet.fi (Robert Harper) (06/27/91)
SANDRO@if1.ufrgs.anrs.br writes: >Hi, > I am needing a set of aligned (by secundary structure) >sequences of small, large and 5S rRNA genes for a phylogenetic >study. I am aware of the existence of compilations and data >banks of such sequences, but I would like to get them by Email. > Can anyone help me with electronic addresses or other >information ? As one of my first attempts at running WAIS I chose the LIMB database as a suitable candidate as a SOURCE. It is on nic.funet.fi as limb.src If I do a search with WAIS for ( 5S rRNA con.net ) it delivers three hits BRD, SRRSD and SRSRSC. The first one does not have a con.net The second one you can try fox@uhrcc2.bitnet or fox@uhrcc2.crcc.uh.edu and for the third one DEWACHTER@CCV.UIA.AC.BE The address for BRD is as follows: con.nam Thomas Specht con.add Institut fur Biochemie-FB Chemie Otto-Hahn-Bau Thielallee 63 D-1000 Berlin 33 WEST GERMANY con.tel [011-49] 30-838-6404 Rob "WAIS" Harper
usercu11@mts.ucs.ualberta.ca (06/28/91)
In article <1991Jun27.131046.3683@nic.funet.fi> harper@nic.funet.fi (Robert Harper) writes: >As one of my first attempts at running WAIS I chose the LIMB database >as a suitable candidate as a SOURCE. It is on nic.funet.fi as limb.src >If I do a search with WAIS for ( 5S rRNA con.net ) it delivers three hits >BRD, SRRSD and SRSRSC. The first one does not have a con.net >The second one you can try fox@uhrcc2.bitnet or fox@uhrcc2.crcc.uh.edu >and for the third one DEWACHTER@CCV.UIA.AC.BE > >Rob "WAIS" Harper > I'm sorry, but could you explain that! Are you using WAIS to search LIMB on a foreign machine or did you bring LIMB over to yours? And what's a "con.net"? Anyone else also had a problem un-binhexing WAIS and the demo? I got an error in both (twice). Maybe I'll try the Houston server. Chris "hexed" Upton (apologies to Rob)