[bionet.molbio.genbank] changes to genbank updates

lear@genbank.BIO.NET (Eliot) (08/16/90)

The following modifications will be effected in tonight's update to
bionet.molbio.genbank.updates:

[1]	Updates will no longer be batched into one message.  One
	message will contain one sequence.

[2]	The subject line will contain the ACCESSION number of the
	entry.

Please alert me to any bugs you might notice.

'best,
-- 
Eliot Lear
[lear@turbo.bio.net]

lfk@athena.mit.edu (Lee F Kolakowski) (08/16/90)

It may not break anything, but it does not really add much either.
A better approach might be a shorter bit of the DEFINITION 
as a Subject Line. This would allow persons maintaining small
specific databases and easier scan. 

--

Frank Kolakowski 

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kristoff@genbank.BIO.NET (David Kristofferson) (08/16/90)

Frank and Roy,

	One of the purposes in breaking the messages up was to help
avoid possible truncation problems (although this is not a permanent
solution).  The suggestion of putting the DEFINITION line on the
Subject is a good one which I will discuss with the staff.  The
"Keywords" feature in USENET news might also be of some use in this
regards.
-- 
				Sincerely,

				Dave Kristofferson
				GenBank On-line Service Manager

				kristoff@genbank.bio.net

roy@phri.nyu.edu (Roy Smith) (08/17/90)

In lear@genbank.BIO.NET (Eliot) writes:
> Updates will no longer be batched into one message.  One
> message will contain one sequence.

	I don't see how this could break anything, but I suspect it might
make things significantly less efficient (i.e. if a process gets forked for
each message, it makes for a lot more forking).
--
Roy Smith, Public Health Research Institute
455 First Avenue, New York, NY 10016
roy@alanine.phri.nyu.edu -OR- {att,cmcl2,rutgers,hombre}!phri!roy
"Arcane?  Did you say arcane?  It wouldn't be Unix if it wasn't arcane!"

roy@phri.nyu.edu (Roy Smith) (08/17/90)

kristoff@genbank.BIO.NET (David Kristofferson) writes:
> The suggestion of putting the DEFINITION line on the Subject is a good
> one which I will discuss with the staff.  The "Keywords" feature in
> USENET news might also be of some use in this regards.

	It's been a while since I've perused the appropriate RFCs, but my
recollection is that it is legal to make up headers of your own, starting
with an "X".  It might be a good idea, for example, to have a news article
header called "X-Definition:" which is just the DEFINITION line from the
GenBank locus.
--
Roy Smith, Public Health Research Institute
455 First Avenue, New York, NY 10016
roy@alanine.phri.nyu.edu -OR- {att,cmcl2,rutgers,hombre}!phri!roy
"Arcane?  Did you say arcane?  It wouldn't be Unix if it wasn't arcane!"