POSTMAST@gunbrf.bitnet (05/01/91)
From: edu%"eesnyder@boulder.colorado.edu" 29-APR-1991 11:18:10.80 To: genbank-bb@colorado.edu CC: Subj: Software for automated subseqence extraction Received: From STANFORD(MAILER) by NBRF with Jnet id 6419 for POSTMASTER@GUNBRF; Mon, 29 Apr 91 11:18 EDT Received: by Forsythe.Stanford.EDU; Sun, 28 Apr 91 18:30:08 PDT Received: by genbank.bio.net (5.61/IG-2.0) id AA18837; Sat, 27 Apr 91 12:45:20 -0700 Received: by genbank.bio.net (5.61/IG-2.0) id AA18789; Sat, 27 Apr 91 12:44:37 -0700 Message-Id: <9104271944.AA18789@genbank.bio.net> To: genbank-bb@colorado.edu From: eesnyder@boulder.colorado.edu (Eric E. Snyder) Subject: Software for automated subseqence extraction Date: 27 Apr 91 18:29:32 GMT Sender: news@colorado.edu (The Daily Planet) Nntp-Posting-Host: beagle.colorado.edu I am looking for some software that will allow me to extract subsequences from genbank or PIR. For example, I would like to be able to provide a keyword such as 'splice site' and have the program search genbank and return with a list of sequence names and the subsequence from each entry corresponding to my keyword. Any leads would be appreciated.... Thanks, --------------------------------------------------------------------------- TTGATTGCTAAACACTGGGCGGCGAATCAGGGTTGGGATCTGAACAAAGACGGTCAGATTCAGTTCGTACTGCTG Eric E. Snyder Department of MCD Biology ...making feet for childrens' shoes. University of Colorado, Boulder Boulder, Colorado 80309-0347 LeuIleAlaLysHisTrpAlaAlaAsnGlnGlyTrpAspLeuAsnLysAspGlyGlnIleGlnPheValLeuLeu ---------------------------------------------------------------------------