[net.origins] Creation of Life

dubois@uwmacc.UUCP (Paul DuBois) (05/22/85)

>> [Mike Johnston]
>> Why would you define someone who comes up with another origins theory a
>> non-scientist. If science decides to base line everything it currently
>> accepts and define anything new as non-science then I think we've just
>> heard the death knell for true science.

> [Keith Doyle]
> I would agree on your last sentence.  However, science does not reject
> new ideas and theories.  However, scientists expect new ideas to have
> certain characteristics that make them worthy of adoption.  Science generally
> does not support several conflicting theories at the same time.

This is not true.  Comment has been made a number of times in this
newsgroup (by evolutionists) about dissent and controversy making for
interesting and healthy scientific endeavor.  One thinks, for instance,
of the concept of multiple working hypotheses.  If they are not
conflicting in some sense, there would appear to be little point in
calling this a method of "multiple" hypotheses.  And if they are not
each supported in some sense, they wouldn't be up for consideration.

> Creation however, suggests little,
> if anything that helps us move forward.  Creation for example, would
> indicate that it is impossible to generate new forms of life via
> experimenting with DNA.  Evolution makes no such claim, and may actually
> be of service in decomposing more exactly what effects the DNA protiens
> have on species etc.  

I doubt that most, or even much, research done today is motivated
either explicitly or implicitly by a desire to create life.  Nor is
that motivation necessary in order to produce worthwhile research.  For
example, the following concerns work done in connection with the
elucidation of the structure of the TMV protein.  It is a virtual
certainly that at least one of the authors harbors no desire to
create life:

  Duane T Gish, L K Ramachandram, W M Stanley, "Studies on the amino acid
  sequence of tobacco mosaic virus (TMV) protein.  I.  Fractionation of
  products of tryptic hydrolysis by countercurrent distribution."
  Archives of Biochemistry, 78(2), December 1958, 433-450.

Yet this was useful research.

By the way, what is a "DNA protein"?


> I'd like to take an example issue with the creationist 'special processes
> which are not now operating in the natural universe'.  This is how the
> creationists purport to explain the creation of the universe, and of all
> the animal and human 'kinds'.

It seems to me that abiogenesis scenarios suffer from a similar
problem:  the natural laws were supposed to be the same, but the events
that occurred were unique and unrepeatable.  (That is, historically
unrepeatable.  One may still hope to simulate the conditions thought to
prevail on the early earth and produce results similar to those thought
to occur then.  It is more difficult to conceive how one might simulate
creation.)

-- 
                                                                    |
Paul DuBois     {allegra,ihnp4,seismo}!uwvax!uwmacc!dubois        --+--
                                                                    |
                                                                    |

ethan@utastro.UUCP (Ethan Vishniac) (05/24/85)

> 
> It seems to me that abiogenesis scenarios suffer from a similar
> problem:  the natural laws were supposed to be the same, but the events
> that occurred were unique and unrepeatable.  (That is, historically
> unrepeatable.  One may still hope to simulate the conditions thought to
> prevail on the early earth and produce results similar to those thought
> to occur then.  It is more difficult to conceive how one might simulate
> creation.)
>                                                                     |
> Paul DuBois     {allegra,ihnp4,seismo}!uwvax!uwmacc!dubois        --+--
>                                                                     |
     I don't see how you can equate the two.  In one case, we are being
asked to accept the idea that whatever happened is unknowable in principle.
In the other case we are being asked to believe that whatever happened 
conformed to laws that are discoverable to this day.  In principle we
can hope to construct a detailed model of how life originated on the Earth
that is completely consistent with the present rules by which the universe
operates.  In fact, there is a considerable body of research aimed at just
this goal.  It may be true that we can never be absolutely sure that 
we know what happened, but the same comment could be applied to my whereabouts
yesterday.  After all, my family and I have only our imperfect memories to
go on.  Maybe we were all brainwashed. :-)

"Don't argue with a fool.      Ethan Vishniac
 Borrow his money."            {charm,ut-sally,ut-ngp,noao}!utastro!ethan
                               Department of Astronomy
                               University of Texas

keithd@cadovax.UUCP (Keith Doyle) (05/31/85)

>>[Keith Doyle]
>>I would agree on your last sentence.  However, science does not reject
>>new ideas and theories.  However, scientists expect new ideas to have
>>certain characteristics that make them worthy of adoption.  Science generally
>>does not support several conflicting theories at the same time.

>This is not true.  Comment has been made a number of times in this
>newsgroup (by evolutionists) about dissent and controversy making for
>interesting and healthy scientific endeavor.  One thinks, for instance,
>of the concept of multiple working hypotheses.  If they are not
>conflicting in some sense, there would appear to be little point in
>calling this a method of "multiple" hypotheses.  And if they are not
>each supported in some sense, they wouldn't be up for consideration.

What I was getting at, (and I could be wrong) is that science usually 
requires that new theories that profess to supplant previous theories,
must better explain the facts than previous theories, and via
Occams razor, should simplify or unify the explanation of these
facts in some manner.

>> Creation however, suggests little,
>> if anything that helps us move forward.  Creation for example, would
>> indicate that it is impossible to generate new forms of life via
>> experimenting with DNA.  Evolution makes no such claim, and may actually
>> be of service in decomposing more exactly what effects the DNA protiens
>> have on species etc.  
>
>I doubt that most, or even much, research done today is motivated
>either explicitly or implicitly by a desire to create life.  Nor is

Certainly some of what I have heard of DNA research is in creation of
new life forms that can 1) manufacture organic materials (usually for
medical use) or 2) metabolize certain materials such as the organism
that can break down oil slicks on water that is used for oil spill cleanups. 

>that motivation necessary in order to produce worthwhile research.  For
>example, the following concerns work done in connection with the
>elucidation of the structure of the TMV protein.  It is a virtual
>certainly that at least one of the authors harbors no desire to
>create life:
>
>  Duane T Gish, L K Ramachandram, W M Stanley, "Studies on the amino acid
>  sequence of tobacco mosaic virus (TMV) protein.  I.  Fractionation of
>  products of tryptic hydrolysis by countercurrent distribution."
>  Archives of Biochemistry, 78(2), December 1958, 433-450.
>
>Yet this was useful research.

I'm not saying that the ONLY use of DNA research is investigation of new
life forms, just that evolution does not consider it impossible.

>By the way, what is a "DNA protein"?

I think that the subgroups of amino acids which are the building blocks of
DNA are considered 'proteins', though I'm sure I could stand some more detailed
enlightenment on this subject.  At work, my only ready reference is the
dictionary, (which is the main reason I am many times lacking in references,
they're not always at hand, a situation I hope to change once I get a modem
at home).  At any rate, one of the definitions of 'amino acid' is: a compound
of the form NH2CHRCOOH, found as essential components of the protein molecule.
And 'protein' is defined as: any of a group of complex nitrogenous organic
compounds of high molecular weight that contain amino acids as their basic
structural units and that occur in all living matter and are essential for
the growth and repair of animal tissue.

As you probably have surmised, I am not a biochemist.  I get the distinct
feeling that this definition of 'protein' in the dictionary leaves something
to be desired.  Actually, I'd love to hear of some good references on DNA,
DNA research, and the comparison of DNA of differing organisms.

Keith Doyle
#  {ucbvax,ihnp4,decvax}!trwrb!cadovax!keithd

lonetto@phri.UUCP (Michael Lonetto) (06/13/85)

> >By the way, what is a "DNA protein"?
> 
> I think that the subgroups of amino acids which are the building blocks of
DNA are considered 'proteins', though I'm sure I could stand some more detailed
> enlightenment on this subject.  At work, my only ready reference is the
> 
> Keith Doyle
> #  {ucbvax,ihnp4,decvax}!trwrb!cadovax!keithd

Huh?  Now wait a minute here.  If we're going to talk about DNA and  RNA
and  protein  we're  all going to have to speak the same language or the
discussion degenerates to babble.

The  building  blocks  of  DNA  are  deoxyribonucleotides.   DNA   means
deoxyribonucleic  acid.   Each  building block consists of a five carbon
sugar molecule(ribose)which is ring shaped.  This  is  attached  at  the
first  carbon to a purine or pyrimidine base and at the last carbon to a
phosphate group.  DNA is made up of two strands, each of which  is  made
up  of  deoxyribonucleotides(see above) which are attached to each other
by sugar-phosphate bonds.  The identity of the base of  each  nucleotide
is  what  gives  the base its identity.  The base identities are what is
referred to as "DNA sequence".  The possible bases are adenine, guanine,
thymine  and  cytosine(A,G,C  and  T).   Since an A on one strand always
pairs with a T on the opposite (complementary) strand, and a  G  on  one
strand   always  pairs  with  a  C  on  the  complementary  strand,  the
INFORMATION encoded in the DNA can be propagated:  ie:  each  strand  of
DNA  can serve as a template for the synthesis of a complementary strand
the information in that DNA can be propagated as an organism grows (each
cell  gets a copy of all the information) and the organism's descendants
each get a copy of the information(NO NITPICKING,  I'M  TRYING  TO  KEEP
THIS SIMPLE).

The  information  on  some  of  the  DNA  can  specify  the structure of
proteins.  In order for this to happen an RNA (ribonucleic acid) copy of
the  DNA  sequence  must  be  made.   This  is  very  similar to new DNA
synthesis, with the exception that only part of one strand of the DNA is
copied.  The information is still in essentially the same form as it was
in the DNA: a linear sequence with a four letter alphabet.  To turn this
information into protein the 4 letter alphabet must be translated to the
20 letter alphabet of AMINO  ACIDS  that  are  the  building  blocks  of
protein.    In  addition  the  protein  must  fold  into  the  proper  3
dimensional form required for "activity".  Proteins DO things.  They are
enzymes  (catalysts), hormones(messengers), recognition (binding) sites,
structures within and around the cell,  etc.   The  proper  sequence  of
amino  acids must be synthesized for each protein in a cell to function.

The  way  the 4 letter code is translated to a 20 letter code is through
"triplets":  From a given start site on an RNA which the cell  machinery
recognizes  three  bases  at a time (three letter words in a four letter
alphabet) are read to specify  one  amino  acid.   Since  there  are  64
combinations  of  three  it's  easy  to  see  how a four letter code can
specify a sequence in 20 letter code.

This is already too long and I have to go back to work,  but  much  more
basic  information  and  PICTURES  (which  make things much clearer) are
available in :

BIOCHEMISTRY  by  Lehninger  -  Highly  reccomended  as  the  most  self
explanatory  undergraduate  biochemistry  text - any library should have
this one.

or

BIOCHEMISTRY by Lubert Stryer - I haven't  read  this  one  but  it  has
excellent pictures of molecules and structures.

-- 
Michael Lonetto  PHRI  NYC  (allegra!phri!lonetto)

"Some win, Some lose, Some refuse to play"